RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 FNDC7Q5VTL7 733 aa12.67□□□□□ -0.38
PRDM16-203ENST00000378391 LRRC29Q8WV35 223 aa12.67□□□□□ -0.38
PRDM16-203ENST00000378391 CCL28Q9NRJ3 127 aa12.67□□□□□ -0.38
PRDM16-203ENST00000378391 IGHV1OR15-9A0A0B4J2B8 117 aa12.67□□□□□ -0.38
PRDM16-203ENST00000378391 A8MXK9 166 aa12.67□□□□□ -0.38
PRDM16-203ENST00000378391 TBX6O95947 436 aaPredicted RBP12.67□□□□□ -0.38
PRDM16-203ENST00000378391 FSTP19883 344 aa12.67□□□□□ -0.38
PRDM16-203ENST00000378391 PEBP1P30086 187 aaKnown RBP12.67□□□□□ -0.38
PRDM16-203ENST00000378391 PLXNA3P51805 1871 aa12.67□□□□□ -0.38
PRDM16-203ENST00000378391 DEFB109BQ30KR1 87 aa12.67□□□□□ -0.38
PRDM16-203ENST00000378391 ALKBH6Q3KRA9 238 aa12.67□□□□□ -0.38
PRDM16-203ENST00000378391 PTPMT1Q8WUK0 201 aaPredicted RBP12.67□□□□□ -0.38
PRDM16-203ENST00000378391 TRPM6Q9BX84 2022 aa12.67□□□□□ -0.38
PRDM16-203ENST00000378391 KLHDC2Q9Y2U9 406 aa12.67□□□□□ -0.38
PRDM16-203ENST00000378391 PGA4P0DJD7 388 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 PGA5P0DJD9 388 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 ZNF766Q5HY98 468 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 hADV38S2A0JD32 116 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 NKX2-6A6NCS4 301 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 RBP4P02753 201 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 SLC35E4Q6ICL7 350 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 ERASQ7Z444 233 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 CXXC4Q9H2H0 198 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 ZFP30Q9Y2G7 519 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 SCN3AQ9NY46 2000 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 CTAG1AP78358 180 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 TMEM116Q8NCL8 245 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 SEBOXQ9HB31 216 aaPredicted RBP12.66□□□□□ -0.38
PRDM16-203ENST00000378391 CORTO00230 105 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 ATP6V0CP27449 155 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 GUCA2BQ16661 112 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 CFAP161Q6P656 301 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 KLK13Q9UKR3 277 aa12.66□□□□□ -0.38
PRDM16-203ENST00000378391 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 SMIM17P0DL12 118 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 CCL2P13500 99 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 KIR3DL2P43630 455 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 TMEM183AQ8IXX5 376 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 ZBTB34Q8NCN2 500 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 VSTM2AQ8TAG5 236 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 SLC7A10Q9NS82 523 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 MRPS18BQ9Y676 258 aaKnown RBP12.65□□□□□ -0.38
PRDM16-203ENST00000378391 IGHV3-43A0A0B4J1X8 118 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 SP1P08047 785 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 IGHV3-43DP0DP04 118 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 NMUP48645 174 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 SRSF4Q08170 494 aaKnown RBP12.65□□□□□ -0.38
PRDM16-203ENST00000378391 MGAT2Q10469 447 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 SLC25A34Q6PIV7 304 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 SLC26A1Q9H2B4 701 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 OR2W1Q9Y3N9 320 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 CAMPP49913 170 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 UBE2L3P68036 154 aaKnown RBP12.65□□□□□ -0.38
PRDM16-203ENST00000378391 PMCHL1Q16048 86 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 OR8B3Q8NGG8 313 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 MISP3Q96FF7 219 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 SHISA7A6NL88 538 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 F12P00748 615 aaPredicted RBP12.65□□□□□ -0.38
PRDM16-203ENST00000378391 TMEM249Q2WGJ8 235 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 UNQ9370/PRO34162Q6UXP9 181 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 D2HGDHQ8N465 521 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 OR10AG1Q8NH19 301 aa12.65□□□□□ -0.38
PRDM16-203ENST00000378391 MAFAQ8NHW3 353 aaPredicted RBP12.65□□□□□ -0.38
PRDM16-203ENST00000378391 PTPRDP23468 1912 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 TRBV5-5A0A0J9YX44 114 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 CTXND1A0A1B0GTU2 59 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 SPINK9Q5DT21 86 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 GZMHP20718 246 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 GAMTQ14353 236 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 PUSL1Q8N0Z8 303 aaKnown RBP12.64□□□□□ -0.39
PRDM16-203ENST00000378391 OR1N2Q8NGR9 330 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 KCNE5Q9UJ90 142 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 KCNAB3O43448 404 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 PRSS12P56730 875 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 H1FOOQ8IZA3 346 aaPredicted RBP12.64□□□□□ -0.39
PRDM16-203ENST00000378391 J3QRE1 110 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 J3QT63 122 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 K7EQS6 105 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 MT-ND6P03923 174 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 AMMECR1LQ6DCA0 310 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 ATRAIDQ6UW56 229 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 CALHM1Q8IU99 346 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 HSPB9Q9BQS6 159 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 ARRDC1-AS1Q9H2J1 176 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 NLRC5Q86WI3 1866 aa12.64□□□□□ -0.39
PRDM16-203ENST00000378391 SPINT1O43278 529 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 ASAH2BP0C7U1 165 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 C1orf53Q5VUE5 145 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 ZNF880Q6PDB4 577 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 RCC2Q9P258 522 aaKnown RBP12.63□□□□□ -0.39
PRDM16-203ENST00000378391 WNT16Q9UBV4 365 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 A0A1W2PR80 420 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 EML2O95834 649 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 PNLIPP16233 465 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 ZNF83P51522 516 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 MRPS11P82912 194 aaKnown RBP12.63□□□□□ -0.39
PRDM16-203ENST00000378391 ZP4Q12836 540 aa12.63□□□□□ -0.39
PRDM16-203ENST00000378391 MRPL30Q8TCC3 161 aaKnown RBP12.63□□□□□ -0.39
PRDM16-203ENST00000378391 RPEQ96AT9 228 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms