RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 STEAP3Q658P3 488 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 C1QL4Q86Z23 238 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 TGIF2LXQ8IUE1 241 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 SETD6Q8TBK2 473 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 GALMQ96C23 342 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 NOL4LQ96MY1 436 aaPredicted RBP12.18□□□□□ -0.46
RAB4B-202ENST00000378307 YPEL2Q96QA6 119 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 ABHD14AQ9BUJ0 271 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 YTHDF1Q9BYJ9 559 aaKnown RBP12.18□□□□□ -0.46
RAB4B-202ENST00000378307 Q9H521 79 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 CHMP1AQ9HD42 196 aaPredicted RBP12.18□□□□□ -0.46
RAB4B-202ENST00000378307 LINC00527Q9UJ94 153 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 JPT1Q9UK76 154 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 HSF4Q9ULV5 492 aa12.18□□□□□ -0.46
RAB4B-202ENST00000378307 TRBV6-6A0A0A6YYG2 114 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 IFITM5A6NNB3 132 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 FGF16O43320 207 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 SLC2A2P11168 524 aaPredicted RBP12.17□□□□□ -0.46
RAB4B-202ENST00000378307 CD1BP29016 333 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 OR3A3P47888 321 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 F2RL1P55085 397 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 NDUFA11Q86Y39 141 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 Q8N9W7 124 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 OR2T10Q8NGZ9 312 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 IL1F10Q8WWZ1 152 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 RITA1Q96K30 269 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 TXNL4BQ9NX01 149 aaKnown RBP12.17□□□□□ -0.46
RAB4B-202ENST00000378307 DNAH3Q8TD57 4116 aa12.17□□□□□ -0.46
RAB4B-202ENST00000378307 A0A1W2PRX2 142 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 NCBP2LA6PVI3 153 aaKnown RBP12.16□□□□□ -0.46
RAB4B-202ENST00000378307 PDCD5O14737 125 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 ST8SIA5O15466 376 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 OPN1MWP04001 364 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 SCTP09683 121 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 OPN1MW2P0DN77 364 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 OPN1MW3P0DN78 364 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 RAB3BP20337 219 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 PSMD7P51665 324 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 LSAMPQ13449 338 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 LY6G6FQ5SQ64 297 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 ZNF773Q6PK81 442 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 ZNF329Q86UD4 541 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 R3HDM4Q96D70 268 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 OR51E2Q9H255 320 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 IFI27L2Q9H2X8 130 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 RNF167Q9H6Y7 350 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 Q9N2K0 584 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 OR1A1Q9P1Q5 309 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 RAB22AQ9UL26 194 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 NOTCH3Q9UM47 2321 aa12.16□□□□□ -0.46
RAB4B-202ENST00000378307 IGKV1-6A0A0C4DH72 117 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 G3V4G9 280 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 LANCL1O43813 399 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 MOSP00540 346 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 IGHG2P01859 326 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 GALP22466 123 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 MYL9P24844 172 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 FGF9P31371 208 aaPredicted RBP12.15□□□□□ -0.46
RAB4B-202ENST00000378307 HLA-DRB3P79483 266 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 ZNF833PQ6ZTB9 187 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 OR56B1Q8NGI3 324 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 S1PR3Q99500 378 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 NABP2Q9BQ15 211 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 CMSS1Q9BQ75 279 aaKnown RBP12.15□□□□□ -0.46
RAB4B-202ENST00000378307 ZNF251Q9BRH9 671 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 MRPL20Q9BYC9 149 aaKnown RBP12.15□□□□□ -0.46
RAB4B-202ENST00000378307 RIMS4Q9H426 269 aaPredicted RBP12.15□□□□□ -0.46
RAB4B-202ENST00000378307 ABRACLQ9P1F3 81 aa12.15□□□□□ -0.46
RAB4B-202ENST00000378307 SAA2-SAA4A0A096LPE2 208 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 TCRBV4S1A1TA0A5B7 111 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 RAB27BO00194 218 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 TXNL1O43396 289 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 SAA2P0DJI9 122 aaPredicted RBP12.14□□□□□ -0.47
RAB4B-202ENST00000378307 GNB3P16520 340 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 CNTFRP26992 372 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 OR2AK2Q8NG84 335 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 FCGR1BQ92637 280 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 ABHD14BQ96IU4 210 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 HSPB9Q9BQS6 159 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 AGMATQ9BSE5 352 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 ABCG5Q9H222 651 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 ELF5Q9UKW6 265 aaPredicted RBP12.14□□□□□ -0.47
RAB4B-202ENST00000378307 STUB1Q9UNE7 303 aa12.14□□□□□ -0.47
RAB4B-202ENST00000378307 PSMB11A5LHX3 300 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 RGS11O94810 467 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 CLEC2LP0C7M8 214 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 CEACAM6P40199 344 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 NEDD8Q15843 81 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 RPL39P5Q59GN2 51 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 C18orf65Q6ZTR6 163 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 MOB1BQ7L9L4 216 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 SLC35E3Q7Z769 313 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 FAM71E2Q8N5Q1 922 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 OR10R2Q8NGX6 335 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 C11orf54Q9H0W9 315 aaPredicted RBP12.13□□□□□ -0.47
RAB4B-202ENST00000378307 C12orf4Q9NQ89 552 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 LIN7CQ9NUP9 197 aaKnown RBP12.13□□□□□ -0.47
RAB4B-202ENST00000378307 SLC23A1Q9UHI7 598 aa12.13□□□□□ -0.47
RAB4B-202ENST00000378307 A0A075B6Q4 140 aa12.12□□□□□ -0.47
RAB4B-202ENST00000378307 SERPINE3A8MV23 424 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms