RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 NDUFA2O43678 99 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 TIAF1O95411 115 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 GNLYP22749 145 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 CAMPP49913 170 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 POLR2GP62487 172 aaKnown RBP eCLIP9.41□□□□□ -0.9
HIF3A-205ENST00000377670 PNRC1Q12796 327 aaPredicted RBP9.41□□□□□ -0.9
HIF3A-205ENST00000377670 COL4A6Q14031 1691 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 CACNG5Q9UF02 275 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 SCAND1P57086 179 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 PRSS3P2Q8NHM4 247 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 ANGPTL4Q9BY76 406 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 OR2D2Q9H210 308 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 VWA8A3KMH1 1905 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 NPIPB8E9PQR5 432 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 COX6A1P12074 109 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 APOBEC3AP31941 199 aaPredicted RBP9.4□□□□□ -0.9
HIF3A-205ENST00000377670 KLF9Q13886 244 aaPredicted RBP9.4□□□□□ -0.9
HIF3A-205ENST00000377670 DMKNQ6E0U4 476 aaPredicted RBP9.4□□□□□ -0.9
HIF3A-205ENST00000377670 SLC26A10Q8NG04 563 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 ASB10Q8WXI3 467 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 ZNF764Q96H86 408 aaPredicted RBP9.4□□□□□ -0.9
HIF3A-205ENST00000377670 ZMIZ1Q9ULJ6 1067 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 PAM16Q9Y3D7 125 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 LRRC37A2A6NM11 1700 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 HTR1DP28221 377 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 MPV17LQ2QL34 196 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 OR2J1Q9GZK6 312 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 PRSS50Q9UI38 385 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 H3BQ15 152 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 SLC25A5P05141 298 aaKnown RBP9.4□□□□□ -0.9
HIF3A-205ENST00000377670 LPAR6P43657 344 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 LYZP61626 148 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 ELOBQ15370 118 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 WDR73Q6P4I2 378 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 AKIRIN1Q9H9L7 192 aaPredicted RBP9.4□□□□□ -0.9
HIF3A-205ENST00000377670 TMEM38BQ9NVV0 291 aa9.4□□□□□ -0.9
HIF3A-205ENST00000377670 ZNF236Q9UL36 1845 aa9.4□□□□□ -0.91
HIF3A-205ENST00000377670 ERVH48-1M5A8F1 160 aa9.4□□□□□ -0.91
HIF3A-205ENST00000377670 NEURL1O76050 574 aa9.4□□□□□ -0.91
HIF3A-205ENST00000377670 GZMHP20718 246 aa9.4□□□□□ -0.91
HIF3A-205ENST00000377670 ACAA2P42765 397 aaKnown RBP9.4□□□□□ -0.91
HIF3A-205ENST00000377670 HLA-DRB5Q30154 266 aa9.4□□□□□ -0.91
HIF3A-205ENST00000377670 OR10AC1Q8NH08 325 aa9.4□□□□□ -0.91
HIF3A-205ENST00000377670 NEUROG3Q9Y4Z2 214 aa9.4□□□□□ -0.91
HIF3A-205ENST00000377670 MFNGO00587 321 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 KCNAB3O43448 404 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 SYNGR3O43761 229 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 TCL1AP56279 114 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 SPCS3P61009 180 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 TSPO2Q5TGU0 170 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 RFLNBQ8N5W9 214 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 OR4S2Q8NH73 311 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 ZNF714Q96N38 554 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 WDR61Q9GZS3 305 aaKnown RBP9.39□□□□□ -0.91
HIF3A-205ENST00000377670 TFPI2P48307 235 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 OR1L6Q8NGR2 347 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 SSC4DQ8WTU2 575 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 NEU4Q8WWR8 484 aaPredicted RBP9.39□□□□□ -0.91
HIF3A-205ENST00000377670 BCL2L2Q92843 193 aaPredicted RBP9.39□□□□□ -0.91
HIF3A-205ENST00000377670 RNASE6Q93091 150 aaKnown RBP9.39□□□□□ -0.91
HIF3A-205ENST00000377670 RHOVQ96L33 236 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 OR2V2Q96R30 315 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 CCL13Q99616 98 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 MSRB2Q9Y3D2 182 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 ROS1P08922 2347 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 OOEPA6NGQ2 149 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 P2RY1P47900 373 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 UCP2P55851 309 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 OR5AU1Q8NGC0 362 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 OR4X2Q8NGF9 303 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 KCNE5Q9UJ90 142 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 FAM181BA6NEQ2 426 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 ZNF253O75346 499 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 LSM6P62312 80 aaKnown RBP9.39□□□□□ -0.91
HIF3A-205ENST00000377670 DGAT2L7PQ6IED9 249 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 ANKRD36A6QL64 1941 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 IGHV1-69-2A0A0G2JMI3 117 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 TMEM229AB2RXF0 380 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 CXCL2P19875 107 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 ETV3LQ6ZN32 361 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 ADAD2Q8NCV1 583 aaKnown RBP9.39□□□□□ -0.91
HIF3A-205ENST00000377670 VN1R17PQ8TDU5 208 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 BLNKQ8WV28 456 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 FLYWCH2Q96CP2 140 aaKnown RBP9.39□□□□□ -0.91
HIF3A-205ENST00000377670 STARD4Q96DR4 205 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 LPAR5Q9H1C0 372 aa9.39□□□□□ -0.91
HIF3A-205ENST00000377670 ZNF275Q9NSD4 429 aaPredicted RBP9.39□□□□□ -0.91
HIF3A-205ENST00000377670 MRM2Q9UI43 246 aaKnown RBP9.39□□□□□ -0.91
HIF3A-205ENST00000377670 A0A0J9YW62 118 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 C19orf67A6NJJ6 358 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 OR4C13Q8NGP0 309 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 CSN3P07498 182 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 UBE2V2Q15819 145 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 ABLIM2Q6H8Q1 611 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 OVCH2Q7RTZ1 564 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 Q8WTZ3 238 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 ITLN1Q8WWA0 313 aa9.38□□□□□ -0.91
HIF3A-205ENST00000377670 ZNF552Q9H707 407 aaPredicted RBP9.38□□□□□ -0.91
HIF3A-205ENST00000377670 DNAH12Q6ZR08 3092 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms