RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 SRSF3P84103 164 aaKnown RBP10.41□□□□□ -0.74
VRK3-202ENST00000377011 MALLQ13021 153 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 PDZK1IP1Q13113 114 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 PEA15Q15121 130 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 TAF9Q16594 264 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 SPATA46Q5T0L3 261 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 LIAT1Q6ZQX7 453 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 CBLN2Q8IUK8 224 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 SAXO1Q8IYX7 474 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 C15orf54Q8N8G6 183 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 RTN4IP1Q8WWV3 396 aaPredicted RBP10.41□□□□□ -0.74
VRK3-202ENST00000377011 MRPL24Q96A35 216 aaKnown RBP10.41□□□□□ -0.74
VRK3-202ENST00000377011 SULT4A1Q9BR01 284 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 EGLN1Q9GZT9 426 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 HRH4Q9H3N8 390 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 ZNF442Q9H7R0 627 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 TMED3Q9Y3Q3 217 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 LYNX1G3V0Z9 82 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 LYNX1P0DP58 116 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 DUSP1P28562 367 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 LPAR6P43657 344 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 NPBWR1P48145 328 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 UCP2P55851 309 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 RBM11P57052 281 aaKnown RBP10.41□□□□□ -0.74
VRK3-202ENST00000377011 EFNB3Q15768 340 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 RNF212Q495C1 297 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 OR10AD1Q8NGE0 317 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 OR2AE1Q8NHA4 323 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 ABHD14BQ96IU4 210 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 CYYR1Q96J86 154 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 HDHD3Q9BSH5 251 aaPredicted RBP10.41□□□□□ -0.74
VRK3-202ENST00000377011 RSRP1Q9BUV0 290 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 C1QTNF5Q9BXJ0 243 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 COA4Q9NYJ1 87 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 STARD10Q9Y365 291 aa10.41□□□□□ -0.74
VRK3-202ENST00000377011 C5orf49A4QMS7 147 aa10.4□□□□□ -0.74
VRK3-202ENST00000377011 SPRY1O43609 319 aaPredicted RBP10.4□□□□□ -0.74
VRK3-202ENST00000377011 ANGPTL7O43827 346 aa10.4□□□□□ -0.74
VRK3-202ENST00000377011 SFTA3P0C7M3 94 aa10.4□□□□□ -0.74
VRK3-202ENST00000377011 FUT3P21217 361 aa10.4□□□□□ -0.74
VRK3-202ENST00000377011 GLRXP35754 106 aa10.4□□□□□ -0.74
VRK3-202ENST00000377011 TMEM33P57088 247 aa10.4□□□□□ -0.74
VRK3-202ENST00000377011 RAB5BP61020 215 aa10.4□□□□□ -0.74
VRK3-202ENST00000377011 GINS3Q9BRX5 216 aa10.4□□□□□ -0.74
VRK3-202ENST00000377011 IFT22Q9H7X7 185 aa10.4□□□□□ -0.74
VRK3-202ENST00000377011 TUBA4BQ9H853 241 aa10.4□□□□□ -0.74
VRK3-202ENST00000377011 SLC2A9Q9NRM0 540 aa10.4□□□□□ -0.74
VRK3-202ENST00000377011 STRAPQ9Y3F4 350 aaKnown RBP10.4□□□□□ -0.74
VRK3-202ENST00000377011 PIGBOS1A0A0B4J2F0 54 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 IGKV1-12A0A0C4DH73 117 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 DUXBA0A1W2PPF3 345 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 B9A039 149 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 IGKV1D-12P01611 117 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 MBPP02686 304 aaPredicted RBP10.39□□□□□ -0.75
VRK3-202ENST00000377011 CRYBA1P05813 215 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 OR5AC1P0C628 307 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 COX5BP10606 129 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 MPV17P39210 176 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 HERV-K104P61576 105 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 RND3P61587 244 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 SPRNQ5BIV9 151 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 DMRTC1Q5HYR2 192 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 COLCA1Q6ZS62 124 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 MSI2Q96DH6 328 aaKnown RBP10.39□□□□□ -0.75
VRK3-202ENST00000377011 KIRREL1Q96J84 757 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 DUSP13Q9UII6 198 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 ST3GAL6Q9Y274 331 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 LSM5Q9Y4Y9 91 aaKnown RBP10.39□□□□□ -0.75
VRK3-202ENST00000377011 JMJD1CQ15652 2540 aa10.39□□□□□ -0.75
VRK3-202ENST00000377011 MEX3AA1L020 520 aaKnown RBP10.38□□□□□ -0.75
VRK3-202ENST00000377011 COLCA2A8K830 154 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 GEMIN2O14893 280 aaKnown RBP10.38□□□□□ -0.75
VRK3-202ENST00000377011 ST8SIA3O43173 380 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 CDS2O95674 445 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 RCC1P18754 421 aaPredicted RBP10.38□□□□□ -0.75
VRK3-202ENST00000377011 AKR1D1P51857 326 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 PRSS12P56730 875 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 B2MP61769 119 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 PLCXD3Q63HM9 321 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 Q6ZRG5 221 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 RXFP4Q8TDU9 374 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 TOMM40LQ969M1 308 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 C12orf57Q99622 126 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 CDH20Q9HBT6 801 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 DNHD1Q96M86 4753 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 FAM157AC9JC47 383 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 F12P00748 615 aaPredicted RBP10.38□□□□□ -0.75
VRK3-202ENST00000377011 SPP1P10451 314 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 RPL35P42766 123 aaKnown RBP10.38□□□□□ -0.75
VRK3-202ENST00000377011 MEOX2P50222 304 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 EFNA4P52798 201 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 ZNF92Q03936 586 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 TBC1D28Q2M2D7 210 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 FOXRED2Q8IWF2 684 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 LFNGQ8NES3 379 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 C10orf105Q8TEF2 133 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 MARS2Q96GW9 593 aaKnown RBP10.38□□□□□ -0.75
VRK3-202ENST00000377011 SPIN2AQ99865 258 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 SPIN2BQ9BPZ2 258 aa10.38□□□□□ -0.75
VRK3-202ENST00000377011 ADAT1Q9BUB4 502 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms