RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 MRGPRDQ8TDS7 321 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 ABHD17AQ96GS6 310 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 COQ2Q96H96 371 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 RNF115Q9Y4L5 304 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 RNF212BA8MTL3 300 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 IFNL4K9M1U5 179 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 IGKV1-39P01597 117 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 HBZP02008 142 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 IGKV1D-39P04432 117 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 FHITP49789 147 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 RAB5CP51148 216 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 BAXQ07812 192 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 MIDNQ504T8 468 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 LRP11Q86VZ4 500 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 SPACA3Q8IXA5 215 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 SEC11CQ9BY50 192 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 CACNG5Q9UF02 275 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 PIEZO2Q9H5I5 2752 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 A0A1B0GWJ7 208 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 CD80P33681 288 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 TMEM88Q6PEY1 159 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 FAM180AQ6UWF9 173 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 TMEM182Q6ZP80 229 aaPredicted RBP16.97■□□□□ 0.31
VSX1-202ENST00000376709 OR52L2PQ8NGH6 319 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 LYPD6BQ8NI32 183 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 TMEM171Q8WVE6 324 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 LSM10Q969L4 123 aaKnown RBP16.97■□□□□ 0.31
VSX1-202ENST00000376709 OR2D2Q9H210 308 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 ESRP2Q9H6T0 727 aaKnown RBP16.97■□□□□ 0.31
VSX1-202ENST00000376709 CACFD1Q9UGQ2 172 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 METRNQ9UJH8 293 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 TP53TG5Q9Y2B4 290 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 CACNA1DQ01668 2161 aa16.97■□□□□ 0.31
VSX1-202ENST00000376709 MAP1BP46821 2468 aaKnown RBP16.97■□□□□ 0.31
VSX1-202ENST00000376709 C1QL1O75973 258 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 CD200P41217 278 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 DYNLT3P51808 116 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 KRTCAP3Q53RY4 240 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 ZNF645Q8N7E2 425 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 TPRX1Q8N7U7 411 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 SFXN3Q9BWM7 321 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 RNF150Q9ULK6 438 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 CADP27708 2225 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 GLIPR1P48060 266 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 MSMPQ1L6U9 139 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 VHLLQ6RSH7 139 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 Q6ZRM9 215 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 C19orf12Q9NSK7 152 aa16.96■□□□□ 0.31
VSX1-202ENST00000376709 STRAPQ9Y3F4 350 aaKnown RBP16.96■□□□□ 0.31
VSX1-202ENST00000376709 SFTA3P0C7M3 94 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 DVL1P1P54792 670 aaPredicted RBP16.95■□□□□ 0.3
VSX1-202ENST00000376709 RPL23AP62750 156 aaKnown RBP16.95■□□□□ 0.3
VSX1-202ENST00000376709 ZNF585BQ52M93 769 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 STX12Q86Y82 276 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 FAM57AQ8TBR7 257 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 SSUH2Q9Y2M2 353 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 ACACAQ13085 2346 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 H3BP45 60 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 IGKV1-5P01602 117 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 CD5P06127 495 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 PAX9P55771 341 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 KLF3P57682 345 aaPredicted RBP16.95■□□□□ 0.3
VSX1-202ENST00000376709 ODF3L1Q8IXM7 274 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 CLRN3Q8NCR9 226 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 RAB40CQ96S21 281 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 NBEAQ8NFP9 2946 aa16.95■□□□□ 0.3
VSX1-202ENST00000376709 C9JQL5 133 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 ATP6V0CP27449 155 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 PRDX2P32119 198 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 SSTR5P35346 364 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 NPBWR1P48145 328 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 CBLN2Q8IUK8 224 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 ZNF808Q8N4W9 903 aaPredicted RBP16.94■□□□□ 0.3
VSX1-202ENST00000376709 CD177Q8N6Q3 437 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 OR2G3Q8NGZ4 309 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 SNAPINO95295 136 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 IGHV3-13P01766 116 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 BMP5P22003 454 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 GLRXP35754 106 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 PPP1CCP36873 323 aaKnown RBP16.94■□□□□ 0.3
VSX1-202ENST00000376709 EDDM3AQ14507 147 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 FAM53AQ6NSI3 398 aaPredicted RBP16.94■□□□□ 0.3
VSX1-202ENST00000376709 ZBTB34Q8NCN2 500 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 OR13A1Q8NGR1 328 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 FAM213BQ8TBF2 198 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 OR2V2Q96R30 315 aa16.94■□□□□ 0.3
VSX1-202ENST00000376709 MEX3AA1L020 520 aaKnown RBP16.93■□□□□ 0.3
VSX1-202ENST00000376709 KIAA1324LA8MWY0 1029 aaPredicted RBP16.93■□□□□ 0.3
VSX1-202ENST00000376709 TOR1AO14656 332 aa16.93■□□□□ 0.3
VSX1-202ENST00000376709 EGR1P18146 543 aa16.93■□□□□ 0.3
VSX1-202ENST00000376709 SNCAP37840 140 aa16.93■□□□□ 0.3
VSX1-202ENST00000376709 COMMD1Q8N668 190 aa16.93■□□□□ 0.3
VSX1-202ENST00000376709 WSB1Q9Y6I7 421 aa16.93■□□□□ 0.3
VSX1-202ENST00000376709 MED19A0JLT2 244 aaPredicted RBP16.92■□□□□ 0.3
VSX1-202ENST00000376709 SRRM5B3KS81 715 aa16.92■□□□□ 0.3
VSX1-202ENST00000376709 SYNGR2O43760 224 aa16.92■□□□□ 0.3
VSX1-202ENST00000376709 CEACAM8P31997 349 aaPredicted RBP16.92■□□□□ 0.3
VSX1-202ENST00000376709 C3orf36Q3SXR2 165 aa16.92■□□□□ 0.3
VSX1-202ENST00000376709 LURAP1Q96LR2 239 aa16.92■□□□□ 0.3
VSX1-202ENST00000376709 DIDO1Q9BTC0 2240 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms