RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 GNMTQ14749 295 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 DEFB136Q30KP8 78 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 NKAPLQ5M9Q1 402 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 LIPKQ5VXJ0 399 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 OR10K2Q6IF99 312 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 OR52L2PQ8NGH6 319 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 KCNG3Q8TAE7 436 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 ABHD14AQ9BUJ0 271 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 TM2D1Q9BX74 207 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 ISYNA1Q9NPH2 558 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 JPT1Q9UK76 154 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 RGS10O43665 173 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 IGHG4P01861 327 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 HTR2CP28335 458 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 PPP1CCP36873 323 aaKnown RBP16.49■□□□□ 0.23
VSX1-201ENST00000376707 CDX1P47902 265 aaPredicted RBP16.49■□□□□ 0.23
VSX1-201ENST00000376707 QRFPP83859 136 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 DGCR2P98153 550 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 KIR2DS1Q14954 304 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 MMDQ15546 238 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 C11orf87Q6NUJ2 197 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 RNF152Q8N8N0 203 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 NEDD4LQ96PU5 975 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 SULT4A1Q9BR01 284 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 TMEM59Q9BXS4 323 aa16.49■□□□□ 0.23
VSX1-201ENST00000376707 ZNF107Q9UII5 783 aaPredicted RBP16.49■□□□□ 0.23
VSX1-201ENST00000376707 TMEM14DPA8MWL7 114 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 OR5H8P0DN80 308 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 SLC2A2P11168 524 aaPredicted RBP16.48■□□□□ 0.23
VSX1-201ENST00000376707 CRHBPP24387 322 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 HTD2P86397 168 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 CFHR3Q02985 330 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 UNC119Q13432 240 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 TRAM1Q15629 374 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 LY6G6FQ5SQ64 297 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 TMEM91Q6ZNR0 172 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 OR6M1Q8NGM8 313 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 OR5M8Q8NGP6 311 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 TMEM203Q969S6 136 aa16.48■□□□□ 0.23
VSX1-201ENST00000376707 RGS11O94810 467 aa16.47■□□□□ 0.23
VSX1-201ENST00000376707 BPNT1O95861 308 aa16.47■□□□□ 0.23
VSX1-201ENST00000376707 IGF1P05019 195 aa16.47■□□□□ 0.23
VSX1-201ENST00000376707 PSMA1P25786 263 aaKnown RBP16.47■□□□□ 0.23
VSX1-201ENST00000376707 MLLT11Q13015 90 aaPredicted RBP16.47■□□□□ 0.23
VSX1-201ENST00000376707 PRSS48Q7RTY5 328 aa16.47■□□□□ 0.23
VSX1-201ENST00000376707 C5orf24Q7Z6I8 188 aa16.47■□□□□ 0.23
VSX1-201ENST00000376707 GALMQ96C23 342 aa16.47■□□□□ 0.23
VSX1-201ENST00000376707 KCTD7Q96MP8 289 aa16.47■□□□□ 0.23
VSX1-201ENST00000376707 B9D2Q9BPU9 175 aa16.47■□□□□ 0.23
VSX1-201ENST00000376707 VCX3BQ9H321 246 aa16.47■□□□□ 0.23
VSX1-201ENST00000376707 ZNF580Q9UK33 172 aa16.47■□□□□ 0.23
VSX1-201ENST00000376707 LRRC42Q9Y546 428 aa16.47■□□□□ 0.23
VSX1-201ENST00000376707 YPEL1O60688 119 aa16.46■□□□□ 0.23
VSX1-201ENST00000376707 CPEP16870 476 aa16.46■□□□□ 0.23
VSX1-201ENST00000376707 ACTBP60709 375 aa16.46■□□□□ 0.23
VSX1-201ENST00000376707 HMGN3Q15651 99 aa16.46■□□□□ 0.23
VSX1-201ENST00000376707 C6orf201Q7Z4U5 140 aa16.46■□□□□ 0.23
VSX1-201ENST00000376707 C4orf3Q8WVX3 66 aa16.46■□□□□ 0.23
VSX1-201ENST00000376707 YPEL2Q96QA6 119 aa16.46■□□□□ 0.23
VSX1-201ENST00000376707 GFI1Q99684 422 aa16.46■□□□□ 0.23
VSX1-201ENST00000376707 ZNF251Q9BRH9 671 aa16.46■□□□□ 0.23
VSX1-201ENST00000376707 FAAP24Q9BTP7 215 aa16.46■□□□□ 0.23
VSX1-201ENST00000376707 MRPL20Q9BYC9 149 aaKnown RBP16.46■□□□□ 0.23
VSX1-201ENST00000376707 ABRACLQ9P1F3 81 aa16.46■□□□□ 0.23
VSX1-201ENST00000376707 RAMP3O60896 148 aa16.45■□□□□ 0.22
VSX1-201ENST00000376707 NAPSAO96009 420 aa16.45■□□□□ 0.22
VSX1-201ENST00000376707 HSMCR30P0CW71 290 aa16.45■□□□□ 0.22
VSX1-201ENST00000376707 PSMB8P28062 276 aa16.45■□□□□ 0.22
VSX1-201ENST00000376707 LUMP51884 338 aaPredicted RBP16.45■□□□□ 0.22
VSX1-201ENST00000376707 RPS25P62851 125 aaKnown RBP16.45■□□□□ 0.22
VSX1-201ENST00000376707 C9orf66Q5T8R8 295 aa16.45■□□□□ 0.22
VSX1-201ENST00000376707 ODF3L1Q8IXM7 274 aa16.45■□□□□ 0.22
VSX1-201ENST00000376707 OR2AK2Q8NG84 335 aa16.45■□□□□ 0.22
VSX1-201ENST00000376707 NABP2Q9BQ15 211 aa16.45■□□□□ 0.22
VSX1-201ENST00000376707 CHCHD6Q9BRQ6 235 aa16.45■□□□□ 0.22
VSX1-201ENST00000376707 NICN1Q9BSH3 213 aa16.45■□□□□ 0.22
VSX1-201ENST00000376707 KCNK15Q9H427 330 aa16.45■□□□□ 0.22
VSX1-201ENST00000376707 A0A0A6YYD4 124 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 SLC17A2O00624 439 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 ARL6IP5O75915 188 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 HSPA13P48723 471 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 ZNF880Q6PDB4 577 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 TMEM65Q6PI78 240 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 SVOPQ8N4V2 548 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 FAM89BQ8N5H3 189 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 IL1F10Q8WWZ1 152 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 LPAR5Q9H1C0 372 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.44■□□□□ 0.22
VSX1-201ENST00000376707 STEAP1Q9UHE8 339 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 WSB1Q9Y6I7 421 aa16.44■□□□□ 0.22
VSX1-201ENST00000376707 SAA2-SAA4A0A096LPE2 208 aa16.43■□□□□ 0.22
VSX1-201ENST00000376707 NBR2O15453 112 aa16.43■□□□□ 0.22
VSX1-201ENST00000376707 SAA2P0DJI9 122 aaPredicted RBP16.43■□□□□ 0.22
VSX1-201ENST00000376707 BLVRBP30043 206 aaPredicted RBP16.43■□□□□ 0.22
VSX1-201ENST00000376707 OR3A3P47888 321 aa16.43■□□□□ 0.22
VSX1-201ENST00000376707 IZUMO2Q6UXV1 221 aa16.43■□□□□ 0.22
VSX1-201ENST00000376707 ZNF833PQ6ZTB9 187 aa16.43■□□□□ 0.22
VSX1-201ENST00000376707 RITA1Q96K30 269 aa16.43■□□□□ 0.22
VSX1-201ENST00000376707 MGLLQ99685 303 aa16.43■□□□□ 0.22
VSX1-201ENST00000376707 CCDC90BQ9GZT6 254 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms