RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 NUTF2P61970 127 aaKnown RBP11.85□□□□□ -0.51
MSH5-202ENST00000375740 SLC25A40Q8TBP6 338 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 MRPL30Q8TCC3 161 aaKnown RBP11.85□□□□□ -0.51
MSH5-202ENST00000375740 GINS3Q9BRX5 216 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 PBDC1Q9BVG4 233 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 RTL8AQ9BWD3 113 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 KIR2DS1A0A191URI9 304 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 J3QT63 122 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 J3QW42 95 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 SOX15O60248 233 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 PGA5P0DJD9 388 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 KIR2DS4P43632 304 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 RND3P61587 244 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 IL13RA2Q14627 380 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 KIR2DS1Q14954 304 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 SPIN3Q5JUX0 258 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 VWA1Q6PCB0 445 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 INO80CQ6PI98 192 aaPredicted RBP11.85□□□□□ -0.51
MSH5-202ENST00000375740 MEX3BQ6ZN04 569 aaKnown RBP11.85□□□□□ -0.51
MSH5-202ENST00000375740 DLL3Q9NYJ7 618 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 TMED3Q9Y3Q3 217 aa11.85□□□□□ -0.51
MSH5-202ENST00000375740 IGKV1D-13A0A0B4J2D9 117 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 DEGS1O15121 323 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 AGFG2O95081 481 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 IGKV1-13P0DP09 117 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 AKR1C8PQ5T2L2 129 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 IGF2-ASQ6U949 168 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 TBC1D26Q86UD7 250 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 SCCPDHQ8NBX0 429 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 OR52M1Q8NGK5 317 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 SARAFQ96BY9 339 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 SNX22Q96L94 193 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 SLC25A31Q9H0C2 315 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 RIMS4Q9H426 269 aaPredicted RBP11.84□□□□□ -0.51
MSH5-202ENST00000375740 RBFOX3A6NFN3 312 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 SFTPCP11686 197 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 P2RY1P47900 373 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 FOXF2Q12947 444 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 ZNF818PQ6ZRF7 136 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 FAM185AQ8N0U4 392 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 SLC35G3Q8N808 338 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 CYB561D1Q8N8Q1 229 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 GPHA2Q96T91 129 aa11.84□□□□□ -0.51
MSH5-202ENST00000375740 IGHV3-64DA0A0J9YX35 117 aa11.83□□□□□ -0.51
MSH5-202ENST00000375740 K7N7A8 449 aa11.83□□□□□ -0.51
MSH5-202ENST00000375740 TUSC2O75896 110 aa11.83□□□□□ -0.51
MSH5-202ENST00000375740 GZMBP10144 247 aa11.83□□□□□ -0.51
MSH5-202ENST00000375740 PSG7Q13046 419 aa11.83□□□□□ -0.51
MSH5-202ENST00000375740 Q6P435 159 aa11.83□□□□□ -0.51
MSH5-202ENST00000375740 SPSB3Q6PJ21 355 aa11.83□□□□□ -0.51
MSH5-202ENST00000375740 ZNF429Q86V71 674 aa11.83□□□□□ -0.51
MSH5-202ENST00000375740 GAPTQ8N292 157 aa11.83□□□□□ -0.51
MSH5-202ENST00000375740 LRP5LA4QPB2 252 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 MKRN2OSH3BPM6 223 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 SRP19P09132 144 aaKnown RBP11.83□□□□□ -0.52
MSH5-202ENST00000375740 CTXN2P0C2S0 81 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 RAC2P15153 192 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 NUBP1P53384 320 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 PCSK4Q6UW60 755 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 WDR31Q8NA23 367 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 TMEM222Q9H0R3 208 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 CCL28Q9NRJ3 127 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 UBE2J1Q9Y385 318 aaPredicted RBP11.83□□□□□ -0.52
MSH5-202ENST00000375740 ELOA3CA0A087WX78 387 aaPredicted RBP11.83□□□□□ -0.52
MSH5-202ENST00000375740 TRBV6-6A0A0A6YYG2 114 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 E5RGE8 158 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 RELQ04864 619 aaPredicted RBP11.83□□□□□ -0.52
MSH5-202ENST00000375740 TCF15Q12870 199 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 TAAR6Q96RI8 345 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 PLEKHA2Q9HB19 425 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 NSG2Q9Y328 171 aa11.83□□□□□ -0.52
MSH5-202ENST00000375740 BORCS7-ASMTA0A0B4J1R7 106 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 SMCO3A2RU48 225 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 ZNF891A8MT65 544 aaPredicted RBP11.82□□□□□ -0.52
MSH5-202ENST00000375740 PRR33A8MZF0 331 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 CDIPTO14735 213 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 CNOT4O95628 575 aaKnown RBP11.82□□□□□ -0.52
MSH5-202ENST00000375740 MPV17P39210 176 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 ZNF880Q6PDB4 577 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 FRYQ5TBA9 3013 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 NKX2-6A6NCS4 301 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 IQCF6A8MYZ5 107 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 SIRPB1O00241 398 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 CEACAM4O75871 244 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 GRPP07492 148 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 ERVK11-1P61568 191 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 TNFRSF9Q07011 255 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 LOC400499M0QZD8 3231 aa11.82□□□□□ -0.52
MSH5-202ENST00000375740 TRAV39A0A0B4J263 110 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 COX5AP20674 150 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 ZNF154Q13106 437 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 ACSF3Q4G176 576 aaPredicted RBP11.81□□□□□ -0.52
MSH5-202ENST00000375740 ZNF695Q8IW36 515 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 KLF14Q8TD94 323 aaPredicted RBP11.81□□□□□ -0.52
MSH5-202ENST00000375740 FAM210BQ96KR6 192 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 TMEM56Q96MV1 263 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 NDUFAF3Q9BU61 184 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 PLSCR4Q9NRQ2 329 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 OR14J1Q9UGF5 321 aa11.81□□□□□ -0.52
MSH5-202ENST00000375740 POLDIP2Q9Y2S7 368 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms