RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 HIPK2Q9H2X6 1198 aa11.26□□□□□ -0.61
CUL4A-203ENST00000375441 PLEKHA3Q9HB20 300 aa11.26□□□□□ -0.61
CUL4A-203ENST00000375441 DLL3Q9NYJ7 618 aa11.26□□□□□ -0.61
CUL4A-203ENST00000375441 MTCH1Q9NZJ7 389 aa11.26□□□□□ -0.61
CUL4A-203ENST00000375441 TMEM30CPA0ZSE6 113 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 A8MXE2 369 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 DEFB108AA8MXU0 73 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 J3QT63 122 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 SLC25A6P12236 298 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 ICAM4Q14773 271 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 MEGF10Q96KG7 1140 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 DUSP13Q9UII6 198 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 DMRT1Q9Y5R6 373 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 G6PCP35575 357 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 FABP6P51161 128 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 EDDM3BP56851 147 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 SERF2P84101 59 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 BATFQ16520 125 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 WDR25Q64LD2 544 aaPredicted RBP11.25□□□□□ -0.61
CUL4A-203ENST00000375441 BTNL3Q6UXE8 466 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 Q8IYB0 196 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 MRPL30Q8TCC3 161 aaKnown RBP11.25□□□□□ -0.61
CUL4A-203ENST00000375441 MUCL1Q96DR8 90 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 RHOVQ96L33 236 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 SAMD10Q9BYL1 202 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 IGHV3-43A0A0B4J1X8 118 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 LOC102723971A0A1B0GUV8 181 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 GATCO43716 136 aaKnown RBP11.25□□□□□ -0.61
CUL4A-203ENST00000375441 SOX15O60248 233 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 IGHV3-43DP0DP04 118 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 CLDND2Q8NHS1 167 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 TMEM171Q8WVE6 324 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 PITPNC1Q9UKF7 332 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 ESPL1Q14674 2120 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 STARD6P59095 220 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 OR8G5Q8NG78 346 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 TMEM147Q9BVK8 224 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 CTDSP1Q9GZU7 261 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 PLA2G2EQ9NZK7 142 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 CLN8Q9UBY8 286 aa11.25□□□□□ -0.61
CUL4A-203ENST00000375441 KLF13Q9Y2Y9 288 aaPredicted RBP11.25□□□□□ -0.61
CUL4A-203ENST00000375441 MT-CO2P00403 227 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 KITLGP21583 273 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 HTD2P86397 168 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 ID3Q02535 119 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 C16orf82Q7Z2V1 217 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 OR2M7Q8NG81 312 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 MRGPRDQ8TDS7 321 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 AURKAIP1Q9NWT8 199 aaPredicted RBP11.24□□□□□ -0.61
CUL4A-203ENST00000375441 LOC102723996A0A087X1L8 192 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 ZNF716A6NP11 495 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 PAGE4O60829 102 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 PAX6P26367 422 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 HIST1H3AP68431 136 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 PMS2P11Q13670 270 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 RNPS1Q15287 305 aaKnown RBP11.24□□□□□ -0.61
CUL4A-203ENST00000375441 GCNT2Q8N0V5 402 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 IL22RA2Q969J5 263 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 RBKSQ9H477 322 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 CXCL1P09341 107 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 GPR12P47775 334 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 OR2T10Q8NGZ9 312 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 RCC1LQ96I51 464 aaKnown RBP11.24□□□□□ -0.61
CUL4A-203ENST00000375441 C1QTNF5Q9BXJ0 243 aa11.24□□□□□ -0.61
CUL4A-203ENST00000375441 ROS1P08922 2347 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 ELOBQ15370 118 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 TAF15Q92804 592 aaKnown RBP eCLIP11.23□□□□□ -0.61
CUL4A-203ENST00000375441 NEIL1Q96FI4 390 aaPredicted RBP11.23□□□□□ -0.61
CUL4A-203ENST00000375441 FER1L6-AS2Q96M78 137 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 REPIN1Q9BWE0 567 aaKnown RBP11.23□□□□□ -0.61
CUL4A-203ENST00000375441 PSG11Q9UQ72 335 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 PPP1CBP62140 327 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 MEF2BQ02080 365 aaPredicted RBP11.23□□□□□ -0.61
CUL4A-203ENST00000375441 Q3ZCU0 254 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 PMS2CLQ68D20 193 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 SLC23A3Q6PIS1 610 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 SPNS3Q6ZMD2 512 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 SAXO1Q8IYX7 474 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 FGFRL1Q8N441 504 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 DTD1Q8TEA8 209 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 BTF3L4Q96K17 158 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 HES7Q9BYE0 225 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 SERTAD4Q9NUC0 356 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 CISD1Q9NZ45 108 aaKnown RBP11.23□□□□□ -0.61
CUL4A-203ENST00000375441 TREM2Q9NZC2 230 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 FUT9Q9Y231 359 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 POLEQ07864 2286 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 CDC34P49427 236 aaPredicted RBP11.23□□□□□ -0.61
CUL4A-203ENST00000375441 FAM78BQ5VT40 261 aa11.23□□□□□ -0.61
CUL4A-203ENST00000375441 NCOA6Q14686 2063 aaPredicted RBP11.23□□□□□ -0.61
CUL4A-203ENST00000375441 KLF7O75840 302 aaPredicted RBP11.22□□□□□ -0.61
CUL4A-203ENST00000375441 VHLLQ6RSH7 139 aa11.22□□□□□ -0.61
CUL4A-203ENST00000375441 ZNF705AQ6ZN79 300 aaPredicted RBP11.22□□□□□ -0.61
CUL4A-203ENST00000375441 LINC00596Q86U02 117 aa11.22□□□□□ -0.61
CUL4A-203ENST00000375441 DOCK7Q96N67 2140 aa11.22□□□□□ -0.61
CUL4A-203ENST00000375441 F6UZH7 168 aa11.22□□□□□ -0.61
CUL4A-203ENST00000375441 LYZL6O75951 148 aa11.22□□□□□ -0.61
CUL4A-203ENST00000375441 MEOX1P50221 254 aa11.22□□□□□ -0.61
CUL4A-203ENST00000375441 ATP6V1FQ16864 119 aa11.22□□□□□ -0.61
CUL4A-203ENST00000375441 BAGE3Q86Y29 109 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms