RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 MAP1LC3BQ9GZQ8 125 aa15.38■□□□□ 0.05
PTPDC1-202ENST00000375360 NPDC1Q9NQX5 325 aaPredicted RBP15.38■□□□□ 0.05
PTPDC1-202ENST00000375360 WSB1Q9Y6I7 421 aa15.38■□□□□ 0.05
PTPDC1-202ENST00000375360 MFNGO00587 321 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 KIAA0141Q14154 515 aaPredicted RBP15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 LYPD8Q6UX82 237 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 SPRR3Q9UBC9 169 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 IL36RNQ9UBH0 155 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 TANC1Q9C0D5 1861 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 LOC390937A0A1W2PQ73 354 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 PTGDSP41222 190 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 BPIFB3P59826 476 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 FLYWCH2Q96CP2 140 aaKnown RBP15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 HSD17B10Q99714 261 aaKnown RBP15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 C5orf66Q9H5L9 145 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 OR5AC2Q9NZP5 309 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 NUDT19A8MXV4 375 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 KCNMB1Q16558 191 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 PIEZO2Q9H5I5 2752 aa15.37■□□□□ 0.05
PTPDC1-202ENST00000375360 CXorf66Q5JRM2 361 aaPredicted RBP15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 TIMM23BQ5SRD1 257 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 K7EQM0 130 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 ORM2P19652 201 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 ID4P47928 161 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 EWSR1Q01844 656 aaKnown RBP eCLIP15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 ANKRD55Q3KP44 614 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 Q56UQ5 140 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 ZCCHC24Q8N2G6 241 aaKnown RBP15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 OR5P3Q8WZ94 311 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 RHOVQ96L33 236 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 REPIN1Q9BWE0 567 aaKnown RBP15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 HSF4Q9ULV5 492 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 TRIM77I1YAP6 450 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 KLRB1Q12918 225 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 C4orf17Q53FE4 359 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 ABLIM2Q6H8Q1 611 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 OVCH2Q7RTZ1 564 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 C1orf174Q8IYL3 243 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 PIPOXQ9P0Z9 390 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 PPP5D1E7EU14 171 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 SFTA3P0C7M3 94 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 H2BFSP57053 126 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 IL24Q13007 206 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 PDZD11Q5EBL8 140 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 ASPHD2Q6ICH7 369 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 SPACA3Q8IXA5 215 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 BPIFCQ8NFQ6 507 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 GP6Q9HCN6 339 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 RNF115Q9Y4L5 304 aa15.36■□□□□ 0.05
PTPDC1-202ENST00000375360 J3QRE1 110 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 SMPD2O60906 423 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 CXCL2P19875 107 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 SSTR5P35346 364 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 CSN1S1P47710 185 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 HILPDAQ9Y5L2 63 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 CSPG4Q6UVK1 2322 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 IGHV3-21A0A0B4J1V1 117 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 IGKV1-9A0A0C4DH69 117 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 OR10G4Q8NGN3 311 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 OR10G9Q8NGN4 311 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 OR10G7Q8NGN6 311 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 CABLES2Q9BTV7 478 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 A0A1W2PPQ1 181 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 DVL1O14640 695 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 GLRXP35754 106 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 P2RY1P47900 373 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 DVL1P1P54792 670 aaPredicted RBP15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 FOXF2Q12947 444 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 GGNQ86UU5 652 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 OR10C1Q96KK4 312 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 ABHD14AQ9BUJ0 271 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 OR11H4Q8NGC9 324 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 VSTM2AQ8TAG5 236 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 HEXA-AS1Q9H8Q6 139 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 FKBP11Q9NYL4 201 aa15.35■□□□□ 0.05
PTPDC1-202ENST00000375360 HOXD11P31277 338 aaPredicted RBP15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 PLAURQ03405 335 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 ANGPTL6Q8NI99 470 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 SNX22Q96L94 193 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 MRPS18CQ9Y3D5 142 aaKnown RBP15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 DNAH12Q6ZR08 3092 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 LY6G6EA0A0G2JKS1 128 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 A0A1W2PN81 502 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 H0YL77 283 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 WISP1O95388 367 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 SNRPCP09234 159 aaKnown RBP15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 ZNF250P15622 560 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 CHRNA7P36544 502 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 BVESQ8NE79 360 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 ZNF714Q96N38 554 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 U3KQA8 63 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 FRMPD3Q5JV73 1810 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 RUNX1Q01196 453 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 ZNF90Q03938 601 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 MMDQ15546 238 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 NCR3LG1Q68D85 454 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 BTNL8Q6UX41 500 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 TMEM147Q9BVK8 224 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 TMUB1Q9BVT8 246 aa15.34■□□□□ 0.05
PTPDC1-202ENST00000375360 RAB29O14966 203 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms