RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 OR1D5P58170 312 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 HIST1H3AP68431 136 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 HMGN3Q15651 99 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 SERTAD4-AS1Q5TG53 156 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 OTPQ5XKR4 325 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 OR2AJ1Q8NGZ0 328 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 PRRG4Q9BZD6 226 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 OR51E2Q9H255 320 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 GPR84Q9NQS5 396 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 KCNS2Q9ULS6 477 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 MEGF11A6BM72 1044 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 HYAL3O43820 417 aaPredicted RBP6.72□□□□□ -1.33
USP48-203ENST00000374732 TTRP02766 147 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 EPCAMP16422 314 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 PRPH2P23942 346 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 PCBP3P57721 371 aaKnown RBP6.72□□□□□ -1.33
USP48-203ENST00000374732 RPS23P62266 143 aaKnown RBP6.72□□□□□ -1.33
USP48-203ENST00000374732 CDK5R2Q13319 367 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 CNIH2Q6PI25 160 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 Q6ZSR6 202 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 ZNF605Q86T29 641 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 SPNS2Q8IVW8 549 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 RBMXL3Q8N7X1 1067 aaKnown RBP6.72□□□□□ -1.33
USP48-203ENST00000374732 GPR26Q8NDV2 337 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 RND1Q92730 232 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 BADQ92934 168 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 PPCDCQ96CD2 204 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 ZNF689Q96CS4 500 aaPredicted RBP6.72□□□□□ -1.33
USP48-203ENST00000374732 NPFFR1Q9GZQ6 430 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 AKTIPQ9H8T0 292 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 SLC52A3Q9NQ40 469 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 MMP26Q9NRE1 261 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 SDR39U1Q9NRG7 319 aaPredicted RBP6.72□□□□□ -1.33
USP48-203ENST00000374732 TXNL4BQ9NX01 149 aaKnown RBP6.72□□□□□ -1.33
USP48-203ENST00000374732 CLCF1Q9UBD9 225 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 HCSTQ9UBK5 93 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 SELENOKQ9Y6D0 94 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 FAM231BA6NCW3 169 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 H7C1C5 153 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 TNFRSF11BO00300 401 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 GABRG2P18507 467 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 AADACP22760 399 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 BLVRBP30043 206 aaPredicted RBP6.72□□□□□ -1.33
USP48-203ENST00000374732 MEOX1P50221 254 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 SGSHP51688 502 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 CLDN15P56746 228 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 ACOT6Q3I5F7 207 aaPredicted RBP6.72□□□□□ -1.33
USP48-203ENST00000374732 ZNF648Q5T619 568 aaPredicted RBP6.72□□□□□ -1.33
USP48-203ENST00000374732 FAM166AQ6J272 317 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 PPP1R32Q7Z5V6 425 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 DCAF4L2Q8NA75 395 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 ZNRF2Q8NHG8 242 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 TWIST2Q8WVJ9 160 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 VOPP1Q96AW1 172 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 SCN5AQ14524 2016 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 OBSL1O75147 1896 aa6.72□□□□□ -1.33
USP48-203ENST00000374732 K7EQS6 105 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 HIST1H2ABP04908 130 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 FAM106CPP0CH98 169 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 TMEM225BP0DP42 221 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 EVI2AP22794 236 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 FCARP24071 287 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 EFNB2P52799 333 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 GRB2P62993 217 aaKnown RBP6.71□□□□□ -1.33
USP48-203ENST00000374732 PRR20EP86478 221 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 PRR20CP86479 221 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 PRR20DP86480 221 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 PRR20BP86481 221 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 PRR20AP86496 221 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 CDK3Q00526 305 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 ATP5G2Q06055 141 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 FAM106AQ4KMX7 169 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 TEX43Q6ZNM6 134 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 HIST3H2AQ7L7L0 130 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 TMEM150AQ86TG1 271 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 HIST1H2ACQ93077 130 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 GMPPAQ96IJ6 420 aaPredicted RBP6.71□□□□□ -1.33
USP48-203ENST00000374732 TVP23BQ9NYZ1 205 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 NUDT4Q9NZJ9 180 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 CCDC167Q9P0B6 97 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 VDAC3Q9Y277 283 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 SIGLEC7Q9Y286 467 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 KLHDC2Q9Y2U9 406 aa6.71□□□□□ -1.33
USP48-203ENST00000374732 TRAV8-6A0A0B4J262 113 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 A0A0G2JK05 382 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 SIRPB1O00241 398 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 MLNRO43193 412 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 DBIP07108 87 aaKnown RBP6.71□□□□□ -1.34
USP48-203ENST00000374732 CHRM4P08173 479 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 ELANEP08246 267 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 CXCL1P09341 107 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 GDF5P43026 501 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 NKX2-1P43699 371 aaPredicted RBP6.71□□□□□ -1.34
USP48-203ENST00000374732 CLDN2P57739 230 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 TRIP6Q15654 476 aaKnown RBP6.71□□□□□ -1.34
USP48-203ENST00000374732 CR1LQ2VPA4 569 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 SUMF2Q8NBJ7 301 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 OR51G1Q8NGK1 321 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 GPER1Q99527 375 aa6.71□□□□□ -1.34
USP48-203ENST00000374732 GPR21Q99679 349 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms