RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 MADCAM1Q13477 382 aa12.15□□□□□ -0.46
HSPG2-201ENST00000374673 IGSF11Q5DX21 431 aa12.15□□□□□ -0.46
HSPG2-201ENST00000374673 CT45A1Q5HYN5 189 aa12.15□□□□□ -0.46
HSPG2-201ENST00000374673 DYNAPQ8N1N2 210 aa12.15□□□□□ -0.46
HSPG2-201ENST00000374673 OR10X1Q8NGY0 326 aa12.15□□□□□ -0.46
HSPG2-201ENST00000374673 CT45A3Q8NHU0 189 aa12.15□□□□□ -0.46
HSPG2-201ENST00000374673 JMJD8Q96S16 334 aa12.15□□□□□ -0.46
HSPG2-201ENST00000374673 ABHD14AQ9BUJ0 271 aa12.15□□□□□ -0.46
HSPG2-201ENST00000374673 MEIS3P1A6NDR6 274 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 OOSP1A8MZH6 123 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 CTXN2P0C2S0 81 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 NAT1P18440 290 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 S100A5P33763 92 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 CEACAM6P40199 344 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 ZNF137PP52743 207 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 SSX2Q16385 188 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 AANATQ16613 207 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 TPTE2P1Q5T6R2 138 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 PYHIN1Q6K0P9 492 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 PRIMA1Q86XR5 153 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 OR2AK2Q8NG84 335 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 OR10J5Q8NHC4 309 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 EDARADDQ8WWZ3 215 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 SNAPC3Q92966 411 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 ABHD1Q96SE0 405 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 IFT46Q9NQC8 304 aa12.14□□□□□ -0.47
HSPG2-201ENST00000374673 VGLL3A8MV65 326 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 BET1O15155 118 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 IL3RAP26951 378 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 IER3P46695 156 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 RAB7AP51149 207 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 RIPPLY3P57055 190 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 MRPS10P82664 201 aaKnown RBP12.13□□□□□ -0.47
HSPG2-201ENST00000374673 BAMBIQ13145 260 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 IL18Q14116 193 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 LRRC75BQ2VPJ9 315 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 TMEM86BQ8N661 226 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 ZDHHC22Q8N966 263 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 TOMM40LQ969M1 308 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 ST6GALNAC6Q969X2 333 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 RPEQ96AT9 228 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 SOSTQ9BQB4 213 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 IFI27L2Q9H2X8 130 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 ESM1Q9NQ30 184 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 RDH8Q9NYR8 311 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 HILPDAQ9Y5L2 63 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 POMT1Q9Y6A1 747 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 CUBNO60494 3623 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 ZFHX3Q15911 3703 aa12.13□□□□□ -0.47
HSPG2-201ENST00000374673 DNAJC9-AS1A6NH13 148 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 CLDN34H7C241 214 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 CTDSPLO15194 276 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 HOXA3O43365 443 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-201ENST00000374673 VENTXO95231 258 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 PAX6P26367 422 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 RCVRNP35243 200 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 DYNLT3P51808 116 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 ARPC4P59998 168 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 ZNF816Q0VGE8 651 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-201ENST00000374673 CCDC144NLQ6NUI1 221 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 CCDC190Q86UF4 302 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 ODF3L1Q8IXM7 274 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 H1FOOQ8IZA3 346 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-201ENST00000374673 LYG1Q8N1E2 194 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 OR5AP2Q8NGF4 316 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 OR6Q1Q8NGQ2 317 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 FAM216AQ8WUB2 273 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 SSMEM1Q8WWF3 244 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 SSX3Q99909 188 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 GINS4Q9BRT9 223 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 AGMATQ9BSE5 352 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 PARP12Q9H0J9 701 aaKnown RBP12.12□□□□□ -0.47
HSPG2-201ENST00000374673 C11orf54Q9H0W9 315 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-201ENST00000374673 DPAGT1Q9H3H5 408 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 GHITMQ9H3K2 345 aa12.12□□□□□ -0.47
HSPG2-201ENST00000374673 FABP12A6NFH5 140 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 GABARAPH6UMI1 98 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 HSD17B6O14756 317 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 ST8SIA5O15466 376 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 FCER2P06734 321 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 ARHGDIBP52566 201 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 DIAPH2-AS1Q14236 149 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 SLC9A3R2Q15599 337 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 CNPY1Q3B7I2 92 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 OR8H3Q8N146 312 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 OR52I2Q8NH67 350 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 OR5R1Q8NH85 324 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 SMIM4Q8WVI0 70 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 NECAP2Q9NVZ3 263 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 PIPOXQ9P0Z9 390 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 MTFP1Q9UDX5 166 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 V9GYH0 126 aa12.11□□□□□ -0.47
HSPG2-201ENST00000374673 MXRA5Q9NR99 2828 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 A0A1W2PPI3 338 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 BTBD17A6NE02 478 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 TXNL1O43396 289 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 LANCL1O43813 399 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 IGHV4-59P01825 116 aa12.1□□□□□ -0.47
HSPG2-201ENST00000374673 GAPDHP04406 335 aaKnown RBP12.1□□□□□ -0.47
HSPG2-201ENST00000374673 ETV6P41212 452 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms