RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 AKR1D1P51857 326 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 PAX9P55771 341 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 MSMO1Q15800 293 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 ZNF506Q5JVG8 444 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 SPSB3Q6PJ21 355 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 C5orf24Q7Z6I8 188 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 CD300LFQ8TDQ1 290 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 IL1F10Q8WWZ1 152 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 PARD6GQ9BYG4 376 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-203ENST00000374490 OR51B6Q9H340 312 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 KCNIP1Q9NZI2 227 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 CLCF1Q9UBD9 225 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 MGAQ8IWI9 3026 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 KIAA1324LA8MWY0 1029 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-203ENST00000374490 SIRPB1O00241 398 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 IGHG3P01860 377 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 EPHA1P21709 976 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 MAS1LP35410 378 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 ZNF154Q13106 437 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 TESK1Q15569 626 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 ACSF3Q4G176 576 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-203ENST00000374490 SPATA46Q5T0L3 261 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 SCGB1C1Q8TD33 95 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 MALSU1Q96EH3 234 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 PSMG3Q9BT73 122 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-203ENST00000374490 OR1A1Q9P1Q5 309 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 RBM7Q9Y580 266 aaKnown RBP11.78□□□□□ -0.52
HMGCL-203ENST00000374490 SETXQ7Z333 2677 aaKnown RBP11.78□□□□□ -0.52
HMGCL-203ENST00000374490 TRAV17A0A0B4J275 112 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 A0A0G2JRQ6 117 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 TMEM30CPA0ZSE6 113 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 SYNGR2O43760 224 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 OR13C7P0DN81 318 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 HBG1P69891 147 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 HBG2P69892 147 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 HABP2Q14520 560 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-203ENST00000374490 SP5Q6BEB4 398 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-203ENST00000374490 SLC25A24Q6NUK1 477 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 IGFL2Q6UWQ7 119 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 WDR86Q86TI4 376 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 C1orf162Q8NEQ5 155 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-203ENST00000374490 OR10G4Q8NGN3 311 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 OR2J1Q9GZK6 312 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 COA4Q9NYJ1 87 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 KCNS2Q9ULS6 477 aa11.78□□□□□ -0.52
HMGCL-203ENST00000374490 FAM87AP0C7U9 286 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 CBR1P16152 277 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 AGAP20933 346 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 IGHV1-2P23083 117 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 IDH3GP51553 393 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-203ENST00000374490 KHDC3LQ587J8 217 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 Q6ZT83 130 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 TMEM217Q8N7C4 229 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 SLC25A40Q8TBP6 338 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 SFT2D1Q8WV19 159 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 GPHA2Q96T91 129 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 HES4Q9HCC6 221 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 PSENENQ9NZ42 101 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 CACNG5Q9UF02 275 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 COL6A6A6NMZ7 2263 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 RTTNQ86VV8 2226 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 CFAP46Q8IYW2 2715 aa11.77□□□□□ -0.53
HMGCL-203ENST00000374490 A0A1W2PR80 420 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 ZNF98A6NK75 572 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 GPR37O15354 613 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 CEACAM4O75871 244 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 SCAF4O95104 1147 aaKnown RBP11.76□□□□□ -0.53
HMGCL-203ENST00000374490 HAND1O96004 215 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 SRP19P09132 144 aaKnown RBP11.76□□□□□ -0.53
HMGCL-203ENST00000374490 RAB5AP20339 215 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 HOXC12P31275 282 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 RPL35P42766 123 aaKnown RBP11.76□□□□□ -0.53
HMGCL-203ENST00000374490 RNFT1Q5M7Z0 435 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 SLC35E4Q6ICL7 350 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 ETV3LQ6ZN32 361 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 FAM214BQ7L5A3 538 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 TCTEX1D1Q8N7M0 179 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 TOLLIPQ9H0E2 274 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 CXXC4Q9H2H0 198 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 MMP24Q9Y5R2 645 aa11.76□□□□□ -0.53
HMGCL-203ENST00000374490 A0A087WWC5 75 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 IGKV1-39P01597 117 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 IGLV2-14P01704 120 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 IGKV1D-39P04432 117 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 S100A6P06703 90 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 CELA3BP08861 270 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 CEACAM6P40199 344 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 C1orf174Q8IYL3 243 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 ZNF295-AS1Q8N0V1 137 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 ZADH2Q8N4Q0 377 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 PRR7Q8TB68 274 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 PPP1R3CQ9UQK1 317 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 A0A1B0GV50 99 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 OOEPA6NGQ2 149 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 CDIPTO14735 213 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 NXPH3O95157 252 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 IGKV1-5P01602 117 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 S100A8P05109 93 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 AKR1C3P42330 323 aa11.75□□□□□ -0.53
HMGCL-203ENST00000374490 CCL20P78556 96 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms