RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 IGHV2-70P01814 119 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 IGKV1D-39P04432 117 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 IZUMO4Q1ZYL8 232 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 FAM180AQ6UWF9 173 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 LINC00696Q6ZRV3 163 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 LURAP1LQ8IV03 231 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 RCC1LQ96I51 464 aaKnown RBP9.66□□□□□ -0.86
PTPN20-204ENST00000374346 ZMAT5Q9UDW3 170 aaKnown RBP9.66□□□□□ -0.86
PTPN20-204ENST00000374346 TIMM9Q9Y5J7 89 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 MAP1LC3B2A6NCE7 125 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 HIST1H2BKO60814 126 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 OPN1MWP04001 364 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 HIST1H2BJP06899 126 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 ZNF883P0CG24 379 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 OPN1MW2P0DN77 364 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 OPN1MW3P0DN78 364 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 RAC2P15153 192 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 HIST1H2BOP23527 126 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 HIST1H2BBP33778 126 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 HIST1H2BDP58876 126 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 HIST1H2BCP62807 126 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 ZXDAP98168 799 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 PMS2P11Q13670 270 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 SLC10A1Q14973 349 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 HIST2H2BEQ16778 126 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.66□□□□□ -0.86
PTPN20-204ENST00000374346 MDP1Q86V88 176 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 C1orf210Q8IVY1 113 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 FGFRL1Q8N441 504 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 SCCPDHQ8NBX0 429 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 HIST1H2BHQ93079 126 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 HIST1H2BNQ99877 126 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 HIST1H2BMQ99879 126 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 MAP1LC3BQ9GZQ8 125 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 MBNL3Q9NUK0 354 aaKnown RBP9.66□□□□□ -0.86
PTPN20-204ENST00000374346 SLC39A9Q9NUM3 307 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 PLA2G3Q9NZ20 509 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 PRSS50Q9UI38 385 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 WIPI2Q9Y4P8 454 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 PCSK5Q92824 1860 aa9.66□□□□□ -0.86
PTPN20-204ENST00000374346 ARGFXA6NJG6 315 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 CEBPZOSA8MTT3 80 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 MT-CO3P00414 261 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 MBP02144 154 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 TRGC2P03986 189 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 MEOX1P50221 254 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 RND2P52198 227 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 FGF8P55075 233 aaPredicted RBP9.65□□□□□ -0.86
PTPN20-204ENST00000374346 TGFBR3Q03167 851 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 SLC38A11Q08AI6 406 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 ZNF146Q15072 292 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 ATP6V1FQ16864 119 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 ZNF585BQ52M93 769 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 SPATA46Q5T0L3 261 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 DRAM1Q8N682 238 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 TAF15Q92804 592 aaKnown RBP eCLIP9.65□□□□□ -0.86
PTPN20-204ENST00000374346 BCL2L2Q92843 193 aaPredicted RBP9.65□□□□□ -0.86
PTPN20-204ENST00000374346 GALMQ96C23 342 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 SPRY4Q9C004 299 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 GP6Q9HCN6 339 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 SDF2L1Q9HCN8 221 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 UBE2L5PA0A1B0GUS4 154 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 C9orf172C9J069 976 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 ZNF737O75373 536 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 CLDN1O95832 211 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 IL18BPO95998 194 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 PDGFBP01127 241 aaPredicted RBP9.65□□□□□ -0.86
PTPN20-204ENST00000374346 SP1P08047 785 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 CATR1Q13166 79 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 ZNF645Q8N7E2 425 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 CA5BP1Q8WTZ4 195 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 NINJ1Q92982 152 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 LHX4Q969G2 390 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 OR4C12Q96R67 309 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 CDH20Q9HBT6 801 aa9.65□□□□□ -0.86
PTPN20-204ENST00000374346 COL27A1Q8IZC6 1860 aaPredicted RBP9.65□□□□□ -0.87
PTPN20-204ENST00000374346 A0A1W2PR80 420 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 PGA5P0DJD9 388 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 CD46P15529 392 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 SELEP16581 610 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 ELLP55199 621 aaPredicted RBP9.64□□□□□ -0.87
PTPN20-204ENST00000374346 UBE2NP61088 152 aaKnown RBP9.64□□□□□ -0.87
PTPN20-204ENST00000374346 ERVK11-1P61568 191 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 TNFRSF9Q07011 255 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 ARL16Q0P5N6 197 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 GABRA6Q16445 453 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 FAM209BQ5JX69 171 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 FER1L6-AS2Q96M78 137 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 PFDN5Q99471 154 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 VSIRQ9H7M9 311 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 NAT8Q9UHE5 227 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 TRBV24-1A0A075B6N3 115 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 TRAV39A0A0B4J263 110 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 TMEM30CPA0ZSE6 113 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 TMEM210A6NLX4 147 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 CDIPTO14735 213 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 SPINK2P20155 84 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 PSMB3P49720 205 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 CD81P60033 236 aa9.64□□□□□ -0.87
PTPN20-204ENST00000374346 PPP1CBP62140 327 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms