RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 WIPI2Q9Y4P8 454 aa16.69■□□□□ 0.26
LHX3-202ENST00000371748 A0A1W2PPE3 182 aa16.69■□□□□ 0.26
LHX3-202ENST00000371748 A8MXE2 369 aa16.69■□□□□ 0.26
LHX3-202ENST00000371748 MT-ND4LP03901 98 aa16.69■□□□□ 0.26
LHX3-202ENST00000371748 HMGN3Q15651 99 aa16.69■□□□□ 0.26
LHX3-202ENST00000371748 AWAT1Q58HT5 328 aa16.69■□□□□ 0.26
LHX3-202ENST00000371748 CLEC9AQ6UXN8 241 aa16.69■□□□□ 0.26
LHX3-202ENST00000371748 OR10V1Q8NGI7 309 aa16.69■□□□□ 0.26
LHX3-202ENST00000371748 ARV1Q9H2C2 271 aa16.69■□□□□ 0.26
LHX3-202ENST00000371748 METRNQ9UJH8 293 aa16.69■□□□□ 0.26
LHX3-202ENST00000371748 LINC00587B1AMM8 73 aa16.68■□□□□ 0.26
LHX3-202ENST00000371748 S100A8P05109 93 aa16.68■□□□□ 0.26
LHX3-202ENST00000371748 LMO1P25800 156 aa16.68■□□□□ 0.26
LHX3-202ENST00000371748 TESK1Q15569 626 aa16.68■□□□□ 0.26
LHX3-202ENST00000371748 MIDNQ504T8 468 aa16.68■□□□□ 0.26
LHX3-202ENST00000371748 BSCL2Q96G97 398 aaPredicted RBP16.68■□□□□ 0.26
LHX3-202ENST00000371748 C7orf77A4D0Y5 90 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 NPIPB11E5RHQ5 1161 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 PRRG2O14669 202 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 CDS2O95674 445 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 TSPAN15O95858 294 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 UCP1P25874 307 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 AESQ08117 197 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 OR4D5Q8NGN0 318 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 LRRC29Q8WV35 223 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 ISOC2Q96AB3 205 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 FAM212BQ9NTI7 297 aaPredicted RBP16.67■□□□□ 0.26
LHX3-202ENST00000371748 A0A0G2JNJ9 132 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 A0A1B0GWJ7 208 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 E5RGE8 158 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 ZNF561Q8N587 486 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 OR51H1Q8NH63 302 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 TUBA4BQ9H853 241 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 Q9UFV3 132 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 NSG2Q9Y328 171 aa16.67■□□□□ 0.26
LHX3-202ENST00000371748 TMEM30CPA0ZSE6 113 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 K7ENP7 123 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 S100A6P06703 90 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 SNRNP70P08621 437 aaKnown RBP16.66■□□□□ 0.26
LHX3-202ENST00000371748 DANCRP0C864 163 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 SPRNQ5BIV9 151 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 PLEKHA2Q9HB19 425 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 SEBOXQ9HB31 216 aaPredicted RBP16.66■□□□□ 0.26
LHX3-202ENST00000371748 ZDHHC8Q9ULC8 765 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 RCL1Q9Y2P8 373 aaKnown RBP16.66■□□□□ 0.26
LHX3-202ENST00000371748 RBM7Q9Y580 266 aaKnown RBP16.66■□□□□ 0.26
LHX3-202ENST00000371748 H0Y980 276 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.66■□□□□ 0.26
LHX3-202ENST00000371748 ST8SIA3O43173 380 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 ADAM20O43506 726 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 IGLV2-14P01704 120 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 F2RP25116 425 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 GLRXP35754 106 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 CEACAM6P40199 344 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 FHITP49789 147 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 NKX6-1P78426 367 aaPredicted RBP16.66■□□□□ 0.26
LHX3-202ENST00000371748 COL10A1Q03692 680 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 GUK1Q16774 197 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 SMIM21Q3B7S5 101 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 PRR30Q53SZ7 412 aaPredicted RBP16.66■□□□□ 0.26
LHX3-202ENST00000371748 KDF1Q8NAX2 398 aaPredicted RBP16.66■□□□□ 0.26
LHX3-202ENST00000371748 ICE1Q9Y2F5 2266 aa16.66■□□□□ 0.26
LHX3-202ENST00000371748 CACNA1DQ01668 2161 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 IGHV3-13P01766 116 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 EGR1P18146 543 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 GFRALQ6UXV0 394 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 OR1L1Q8NH94 360 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 COQ2Q96H96 371 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 ZNF251Q9BRH9 671 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 WFDC1Q9HC57 220 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 GSN-AS1Q9NRJ2 163 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 FABP1P07148 127 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 SEC11BP0C7V7 166 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 DAOP14920 347 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 OR3A1P47881 315 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 KLF3P57682 345 aaPredicted RBP16.65■□□□□ 0.26
LHX3-202ENST00000371748 COMMD1Q8N668 190 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 TPRX1Q8N7U7 411 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 OR5D13Q8NGL4 314 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 KCNS2Q9ULS6 477 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 PPP1R3CQ9UQK1 317 aa16.65■□□□□ 0.26
LHX3-202ENST00000371748 A0A1W2PPH5 198 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 S100GP29377 79 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 CCKARP32238 428 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 GABRA2P47869 451 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 MZT1Q08AG7 82 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 ZNF616Q08AN1 781 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 FABP9Q0Z7S8 132 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 FAM53AQ6NSI3 398 aaPredicted RBP16.64■□□□□ 0.25
LHX3-202ENST00000371748 PRR7Q8TB68 274 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 TMEM171Q8WVE6 324 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 C20orf24Q9BUV8 137 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 KCNIP1Q9NZI2 227 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 METTL1Q9UBP6 276 aaKnown RBP16.64■□□□□ 0.25
LHX3-202ENST00000371748 ZMAT5Q9UDW3 170 aaKnown RBP16.64■□□□□ 0.25
LHX3-202ENST00000371748 C12orf77C9JDV5 145 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 PSG2P11465 335 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 CD200P41217 278 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 C3orf36Q3SXR2 165 aa16.64■□□□□ 0.25
LHX3-202ENST00000371748 SLC35E4Q6ICL7 350 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms