RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 KLF9Q13886 244 aaPredicted RBP3.21□□□□□ -1.9
MCF2-203ENST00000370576 TOMM20LQ6UXN7 152 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 SHFQ7M4L6 423 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 C9orf62Q8N4C0 152 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 TCEAL3Q969E4 200 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 CHST5Q9GZS9 411 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 OR51E2Q9H255 320 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 HES4Q9HCC6 221 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 IDI2-AS1Q9NZ38 188 aa3.21□□□□□ -1.9
MCF2-203ENST00000370576 CACNA1GO43497 2377 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 A0A0G2JMM0 328 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 A0A1W2PPB8 328 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 A0A1W2PRS3 328 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 GJE1A6NN92 205 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 KIR3DP1A8MWS1 328 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 AIPO00170 330 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 SLC16A7O60669 478 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 CTRLP40313 264 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 PTH2RP49190 550 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 VEGFCP49767 419 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 BRWD1-AS2P59051 145 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 SNRPEP62304 92 aaKnown RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 BTG1P62324 171 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 HSF1Q00613 529 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 EDDM3AQ14507 147 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 ALG10Q5BKT4 473 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 PDZD11Q5EBL8 140 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 SP5Q6BEB4 398 aaPredicted RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 OR14K1Q8NGZ2 314 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 OR2T4Q8NH00 348 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 OR5R1Q8NH85 324 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 AQP3Q92482 292 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 GCDHQ92947 438 aaPredicted RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 CPNE2Q96FN4 548 aaPredicted RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 LYZL4Q96KX0 146 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 P2RX4Q99571 388 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 ATP5SQ99766 215 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 MARVELD1Q9BSK0 173 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 PRORYQ9H606 182 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 LINC00574Q9H8X3 128 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 CACYBPQ9HB71 228 aaKnown RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 ELOVL5Q9NYP7 299 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 SS18L2Q9UHA2 77 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 AK6Q9Y3D8 172 aaKnown RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 R4GN57 208 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 KIF26BQ2KJY2 2108 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 MYO7AQ13402 2215 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 CLDN25C9JDP6 229 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 PLA2G10O15496 165 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 CNIH1O95406 144 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 PET100P0DJ07 73 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 GRPRP30550 384 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 S100A11P31949 105 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 SMCPP49901 116 aaPredicted RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 NR0B1P51843 470 aaKnown RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 TAS2R31P59538 309 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 RAB5BP61020 215 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 RPL31P62899 125 aaKnown RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 SLC35B1P78383 322 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 MRPS10P82664 201 aaKnown RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 ID2Q02363 134 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 RNASE10Q5GAN6 216 aaKnown RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 C1QL3Q5VWW1 255 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 SSX8Q7RTT4 187 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 SLC16A13Q7RTY0 426 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 OR5AS1Q8N127 324 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 TEX45Q8NA69 505 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 ST6GALNAC3Q8NDV1 305 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 OR51S1Q8NGJ8 323 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 C8orf46Q8TAG6 207 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 SSBP4Q9BWG4 385 aaPredicted RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 DCSTAMPQ9H295 470 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 GLTPQ9NZD2 209 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 TRAV27A0A087WT01 109 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 A0A0J9YW62 118 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 LINC00862A6NCI5 91 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 G3V3Q6 166 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 RRHO14718 337 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 CASKO14936 926 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 TOMM40O96008 361 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 HLA-DPB1P04440 258 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 CTLA4P16410 223 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 NCS1P62166 190 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 HOXC5Q00444 222 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 RNASE12Q5GAN4 147 aaKnown RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 PABPC1L2AQ5JQF8 200 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 GGNBP1Q5YKI7 109 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 BCDIN3DQ7Z5W3 292 aaKnown RBP3.2□□□□□ -1.9
MCF2-203ENST00000370576 COMMD2Q86X83 199 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 DEFB119Q8N690 84 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 LINC00482Q8N8I6 264 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 BPIFB6Q8NFQ5 453 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 OR5M9Q8NGP3 310 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 OR2G2Q8NGZ5 317 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 HPSE2Q8WWQ2 592 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 SARAFQ96BY9 339 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 AMELYQ99218 206 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 TAS2R16Q9NYV7 291 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 DNAJC27Q9NZQ0 273 aa3.2□□□□□ -1.9
MCF2-203ENST00000370576 IER3IP1Q9Y5U9 82 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms