RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 RAB7AP51149 207 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 RAB13P51153 203 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 DYNLT3P51808 116 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 RPL15P61313 204 aaKnown RBP11.96□□□□□ -0.49
COL9A1-204ENST00000370496 LIAT1Q6ZQX7 453 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 LYG1Q8N1E2 194 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 GCDHQ92947 438 aaPredicted RBP11.96□□□□□ -0.49
COL9A1-204ENST00000370496 YPEL2Q96QA6 119 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 RAB18Q9NP72 206 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 OR1A1Q9P1Q5 309 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 PITPNC1Q9UKF7 332 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 TCF19Q9Y242 345 aa11.96□□□□□ -0.49
COL9A1-204ENST00000370496 LY6LH3BQJ8 138 aa11.95□□□□□ -0.5
COL9A1-204ENST00000370496 BET1O15155 118 aa11.95□□□□□ -0.5
COL9A1-204ENST00000370496 XRCC3O43542 346 aa11.95□□□□□ -0.5
COL9A1-204ENST00000370496 HPGDSO60760 199 aa11.95□□□□□ -0.5
COL9A1-204ENST00000370496 APOA1P02647 267 aa11.95□□□□□ -0.5
COL9A1-204ENST00000370496 REG1BP48304 166 aa11.95□□□□□ -0.5
COL9A1-204ENST00000370496 CT45A1Q5HYN5 189 aa11.95□□□□□ -0.5
COL9A1-204ENST00000370496 DTX3Q8N9I9 347 aa11.95□□□□□ -0.5
COL9A1-204ENST00000370496 CT45A3Q8NHU0 189 aa11.95□□□□□ -0.5
COL9A1-204ENST00000370496 ST6GALNAC5Q9BVH7 336 aa11.95□□□□□ -0.5
COL9A1-204ENST00000370496 CCDC59Q9P031 241 aaKnown RBP11.95□□□□□ -0.5
COL9A1-204ENST00000370496 FAM25AB3EWG3 89 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 FAM25CB3EWG5 89 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 FAM25GB3EWG6 89 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 TIMM23O14925 209 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 TXNL1O43396 289 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 HKR1P10072 659 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 ZNF134P52741 427 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 TAS2R20P59543 309 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 ZNF816Q0VGE8 651 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-204ENST00000370496 DIAPH2-AS1Q14236 149 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 TMEM219Q86XT9 240 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 TGIF2LXQ8IUE1 241 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 OR8H3Q8N146 312 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 OR56B4Q8NH76 319 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 EDARADDQ8WWZ3 215 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 CMTM3Q96MX0 182 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 GINS4Q9BRT9 223 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 CABLES2Q9BTV7 478 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 AUNIPQ9H7T9 357 aa11.94□□□□□ -0.5
COL9A1-204ENST00000370496 IGKV1-6A0A0C4DH72 117 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 SMIM31A0A1B0GVY4 71 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 A0A1W2PPI3 338 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 ST8SIA5O15466 376 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 RGS5O15539 181 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 SSX5O60225 188 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 GAPDHP04406 335 aaKnown RBP11.93□□□□□ -0.5
COL9A1-204ENST00000370496 GSTT2P0CG29 244 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 GSTT2BP0CG30 244 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 CD24P25063 80 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 CEACAM6P40199 344 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 RAG2P55895 527 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 HERPUD1Q15011 391 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 SRSF7Q16629 238 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL9A1-204ENST00000370496 IGSF11Q5DX21 431 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 LY6G6FQ5SQ64 297 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 Q6ZS49 121 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 MOB3BQ86TA1 216 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 DRAM1Q8N682 238 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 PIFOQ8TCI5 191 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 DYNC2LI1Q8TCX1 351 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 CAPSLQ8WWF8 208 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 RTN4IP1Q8WWV3 396 aaPredicted RBP11.93□□□□□ -0.5
COL9A1-204ENST00000370496 IFI27L2Q9H2X8 130 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 IFT46Q9NQC8 304 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 CEPT1Q9Y6K0 416 aa11.93□□□□□ -0.5
COL9A1-204ENST00000370496 SAA2-SAA4A0A096LPE2 208 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 IGHV1-3A0A0C4DH29 117 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 A6NDX4 124 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 CHST1O43916 411 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 DIRAS3O95661 229 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 SAA2P0DJI9 122 aaPredicted RBP11.92□□□□□ -0.5
COL9A1-204ENST00000370496 PTHLHP12272 177 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 ELK1P19419 428 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 ZNF137PP52743 207 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 ARPC4P59998 168 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 TAF15Q92804 592 aaKnown RBP eCLIP11.92□□□□□ -0.5
COL9A1-204ENST00000370496 PARP12Q9H0J9 701 aaKnown RBP11.92□□□□□ -0.5
COL9A1-204ENST00000370496 RDH8Q9NYR8 311 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 C1RLQ9NZP8 487 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 RSL24D1Q9UHA3 163 aaKnown RBP11.92□□□□□ -0.5
COL9A1-204ENST00000370496 ADAM30Q9UKF2 790 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 IGKV1D-8A0A087WSZ0 117 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 MEIS3P1A6NDR6 274 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 FAM106CPP0CH98 169 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 CBX5P45973 191 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 FOXL1Q12952 345 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 HES1Q14469 280 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 OR4C13Q8NGP0 309 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 OR4F5Q8NH21 305 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 ST6GALNAC6Q969X2 333 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 AKR1E2Q96JD6 320 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 NPFFR1Q9GZQ6 430 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 RBM38Q9H0Z9 239 aaKnown RBP11.92□□□□□ -0.5
COL9A1-204ENST00000370496 PIPOXQ9P0Z9 390 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 EXTL2Q9UBQ6 330 aa11.92□□□□□ -0.5
COL9A1-204ENST00000370496 ANXA10Q9UJ72 324 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms