RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 FAAP24Q9BTP7 215 aa8.52□□□□□ -1.04
PRPF38B-203ENST00000370025 FRYQ5TBA9 3013 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 IGKV1-27A0A075B6S5 117 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 A0A1B0GUS0 222 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 NGFP01138 241 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 HOXC12P31275 282 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 KIR2DL2P43627 348 aaPredicted RBP8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 JOSD1Q15040 202 aaPredicted RBP8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 GUSBP1Q15486 140 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 LYZL2Q7Z4W2 148 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 ARL6IP6Q8N6S5 226 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 SCNM1Q9BWG6 230 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 LAMP3Q9UQV4 416 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 PCNX1Q96RV3 2341 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 ELOA3CA0A087WX78 387 aaPredicted RBP8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 FAM24AA6NFZ4 105 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 DLEU1O43261 78 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 LYZL6O75951 148 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 UCP3P55916 312 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 COL10A1Q03692 680 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 HERPUD1Q15011 391 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 LBHQ53QV2 105 aaPredicted RBP8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 FAHD2BQ6P2I3 314 aaPredicted RBP8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 SLC22A25Q6T423 547 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 RAB24Q969Q5 203 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 TVP23CQ96ET8 276 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 FAHD2AQ96GK7 314 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 HIST1H2AAQ96QV6 131 aa8.52□□□□□ -1.05
PRPF38B-203ENST00000370025 SPTAN1Q13813 2472 aaKnown RBP8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 SERPINE3A8MV23 424 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 HSD17B6O14756 317 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 DEDDO75618 318 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 DFFBO76075 338 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 FGF8P55075 233 aaPredicted RBP8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 PRDX4Q13162 271 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 MPV17LQ2QL34 196 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 ASCL4Q6XD76 172 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 RBMXL3Q8N7X1 1067 aaKnown RBP8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 ZNF2Q9BSG1 426 aaPredicted RBP8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 PECRQ9BY49 303 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 GTF3C1Q12789 2109 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 SELEP16581 610 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 PLA2G5P39877 138 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 NHLH1Q02575 133 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 PPA1Q15181 289 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 INO80CQ6PI98 192 aaPredicted RBP8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 C6orf201Q7Z4U5 140 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 OR52M1Q8NGK5 317 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 Q96M66 194 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 ZNF442Q9H7R0 627 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 CDH20Q9HBT6 801 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 GFRA3O60609 400 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 DUSP1P28562 367 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 ADIRFQ15847 76 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 GABRA6Q16445 453 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 VWA1Q6PCB0 445 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 ZDHHC23Q8IYP9 409 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 OR4X1Q8NH49 305 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 YPEL4Q96NS1 127 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 C1orf123Q9NWV4 160 aa8.51□□□□□ -1.05
PRPF38B-203ENST00000370025 A0A1W2PPQ1 181 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 ANKRD30BLA7E2S9 258 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 CD300LBA8K4G0 201 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 GPR137BO60478 399 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 TDGF1P3P51864 188 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 ELLP55199 621 aaPredicted RBP8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 COTL1Q14019 142 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 LCN15Q6UWW0 184 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 FBXW12Q6X9E4 464 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 SDSLQ96GA7 329 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 NOL4LQ96MY1 436 aaPredicted RBP8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 PLSCR4Q9NRQ2 329 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 IL36GQ9NZH8 169 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 PROCRQ9UNN8 238 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 FOXI3A8MTJ6 420 aaPredicted RBP8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 H3BP45 60 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 J3QW42 95 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 SIAH2O43255 324 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 OR7C1O76099 320 aaPredicted RBP8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 OR3A1P47881 315 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 CEACAM21Q3KPI0 293 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 OSR2Q8N2R0 312 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 IL22RA2Q969J5 263 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 PPP1R14DQ9NXH3 145 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 HMGB3O15347 200 aaKnown RBP8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 RBMXL2O75526 392 aaKnown RBP8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 IRF2P14316 349 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 ATP6V0CP27449 155 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 SPACA3Q8IXA5 215 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 C1orf162Q8NEQ5 155 aaPredicted RBP8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 TUBG2Q9NRH3 451 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 PITPNC1Q9UKF7 332 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 ANAPC10Q9UM13 185 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 PRR14LQ5THK1 2151 aa8.5□□□□□ -1.05
PRPF38B-203ENST00000370025 IGKV1D-8A0A087WSZ0 117 aa8.49□□□□□ -1.05
PRPF38B-203ENST00000370025 MBD3L4A6NDZ8 208 aaPredicted RBP8.49□□□□□ -1.05
PRPF38B-203ENST00000370025 MBD3L3A6NE82 208 aaPredicted RBP8.49□□□□□ -1.05
PRPF38B-203ENST00000370025 MBD3L5A6NJ08 208 aaPredicted RBP8.49□□□□□ -1.05
PRPF38B-203ENST00000370025 K7EM74 188 aa8.49□□□□□ -1.05
PRPF38B-203ENST00000370025 SRP19P09132 144 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms