RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 FAM216AQ8WUB2 273 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 MEGF9Q9H1U4 602 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 GHITMQ9H3K2 345 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 IGKV1D-8A0A087WSZ0 117 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 FABP12A6NFH5 140 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 OOSP1A8MZH6 123 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 IGHV3-7P01780 117 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 NAT1P18440 290 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 IL3RAP26951 378 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 RAB7AP51149 207 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 MADCAM1Q13477 382 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 CNPY1Q3B7I2 92 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 IGSF11Q5DX21 431 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 CT45A1Q5HYN5 189 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 LHFPL4Q7Z7J7 247 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 LDLRAD3Q86YD5 345 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 GVQW1Q8N7I0 195 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 CT45A3Q8NHU0 189 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 FCAMRQ8WWV6 532 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 GCDHQ92947 438 aaPredicted RBP12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 ZDHHC16Q969W1 377 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 AJUBAQ96IF1 538 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 JMJD8Q96S16 334 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 GINS4Q9BRT9 223 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 ABHD14AQ9BUJ0 271 aa12.6□□□□□ -0.39
PRPF38B-202ENST00000370022 MEIS3P1A6NDR6 274 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 GABARAPH6UMI1 98 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 BET1O15155 118 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 ATP6V1G1O75348 118 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 PTBP1P26599 531 aaKnown RBP eCLIP12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 ARHGDIBP52566 201 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 ZNF134P52741 427 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 ACTBP60709 375 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 ACTG1P63261 375 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 AANATQ16613 207 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 FAM53AQ6NSI3 398 aaPredicted RBP12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 Q6YL49 198 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 OR5AP2Q8NGF4 316 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 OR6Q1Q8NGQ2 317 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 ZNF48Q96MX3 618 aaPredicted RBP12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 SOSTQ9BQB4 213 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 RDH8Q9NYR8 311 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 OR1A1Q9P1Q5 309 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 ZNRD1Q9P1U0 126 aa12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 SOX21Q9Y651 276 aaPredicted RBP12.59□□□□□ -0.39
PRPF38B-202ENST00000370022 LY6LH3BQJ8 138 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 TCF21O43680 179 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 RBBP9O75884 186 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 RCVRNP35243 200 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 ZNF137PP52743 207 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 TAS2R46P59540 309 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 SSBP1Q04837 148 aaKnown RBP12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 SSX2Q16385 188 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 SPANXN2Q5MJ10 180 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 TPTE2P1Q5T6R2 138 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 FAM131AQ6UXB0 335 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 LINC00299Q6ZSB3 139 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 CCDC190Q86UF4 302 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 SIGLECL1Q8N7X8 197 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 SNAPC3Q92966 411 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 RPEQ96AT9 228 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 NECAP2Q9NVZ3 263 aa12.58□□□□□ -0.4
PRPF38B-202ENST00000370022 A0A1W2PPE3 182 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 SLC31A2O15432 143 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 ETV6P41212 452 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 HILS1P60008 231 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 LDLRAD2Q5SZI1 272 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 H1FOOQ8IZA3 346 aaPredicted RBP12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 TMEM86BQ8N661 226 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 SMIM4Q8WVI0 70 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 SSMEM1Q8WWF3 244 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 DPAGT1Q9H3H5 408 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 PIPOXQ9P0Z9 390 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 MTFP1Q9UDX5 166 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 POMT1Q9Y6A1 747 aa12.57□□□□□ -0.4
PRPF38B-202ENST00000370022 MDFIC2A0A1B0GVS7 189 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 TXNL1O43396 289 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 DYNLT3P51808 116 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 BAMBIQ13145 260 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 CDK10Q15131 360 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 LYG1Q8N1E2 194 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 OR52I2Q8NH67 350 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 TOMM40LQ969M1 308 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 ST6GALNAC6Q969X2 333 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 AGMATQ9BSE5 352 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 C11orf54Q9H0W9 315 aaPredicted RBP12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 ZNF107Q9UII5 783 aaPredicted RBP12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 HILPDAQ9Y5L2 63 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 V9GYH0 126 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 CLDN34H7C241 214 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 RAB29O14966 203 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 GSTZ1O43708 216 aaPredicted RBP12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 GAPDHP04406 335 aaKnown RBP12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 IER3P46695 156 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 OR3A3P47888 321 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 ZNF816Q0VGE8 651 aaPredicted RBP12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 ACTBL2Q562R1 376 aa12.56□□□□□ -0.4
PRPF38B-202ENST00000370022 FAM71F2Q6NXP2 309 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms