RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 V9GYH0 126 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 LINC01565O15544 149 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 SLC25A17O43808 307 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 TMEM211Q6ICI0 200 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 PRNDQ9UKY0 176 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 PAPPA2Q9BXP8 1791 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 WDFY1Q8IWB7 410 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 SPEM1Q8N4L4 309 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 SPINK2P20155 84 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 RNF122Q9H9V4 155 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 C1RLQ9NZP8 487 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 GABRG2P18507 467 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 LINC00596Q86U02 117 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 LINC01465Q8N7H1 131 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 STXBP6Q8NFX7 210 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 GBF1Q92538 1859 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 SOD3P08294 240 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 SLC35B1P78383 322 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 TRA2AQ13595 282 aaKnown RBP eCLIP10.93□□□□□ -0.66
HCFC1-202ENST00000369984 FAM53AQ6NSI3 398 aaPredicted RBP10.93□□□□□ -0.66
HCFC1-202ENST00000369984 C16orf47Q6ZP98 133 aaPredicted RBP10.93□□□□□ -0.66
HCFC1-202ENST00000369984 TP53I13Q8NBR0 393 aaPredicted RBP10.93□□□□□ -0.66
HCFC1-202ENST00000369984 HSPB9Q9BQS6 159 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 DPH3P1Q9H4G8 78 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 NKX2-6A6NCS4 301 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 WFDC3Q8IUB2 231 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 PRELID3AQ96N28 172 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 ABCA4P78363 2273 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 FCGR3AP08637 254 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 NSUN5P2Q63ZY6 315 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 GMPPAQ96IJ6 420 aaPredicted RBP10.93□□□□□ -0.66
HCFC1-202ENST00000369984 PARP11Q9NR21 331 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 RABAC1Q9UI14 185 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 OR2W1Q9Y3N9 320 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 OR51B2Q9Y5P1 312 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.93□□□□□ -0.66
HCFC1-202ENST00000369984 GHITMQ9H3K2 345 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 FOXJ2Q9P0K8 574 aa10.93□□□□□ -0.66
HCFC1-202ENST00000369984 PSG2P11465 335 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 LYZL2Q7Z4W2 148 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 OPN4Q9UHM6 478 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 CDS2O95674 445 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 SRD5A2P31213 254 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 LRRC3BQ96PB8 259 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 MS4A7Q9GZW8 240 aaPredicted RBP10.92□□□□□ -0.66
HCFC1-202ENST00000369984 R3HDMLQ9H3Y0 253 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 CXorf65A6NEN9 183 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 RBFOX2O43251 390 aaKnown RBP eCLIP10.92□□□□□ -0.66
HCFC1-202ENST00000369984 PWWP2BQ6NUJ5 590 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 LDLRAD4O15165 306 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 MFAP4P55083 255 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 RAC3P60763 192 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 OR10AC1Q8NH08 325 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 ZFP64Q9NPA5 681 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 THADAQ6YHU6 1953 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 OTX1P32242 354 aaPredicted RBP10.92□□□□□ -0.66
HCFC1-202ENST00000369984 KCNMB1Q16558 191 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 ECSCRQ19T08 205 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 LINC01555Q8NAE3 123 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 ZNF107Q9UII5 783 aaPredicted RBP10.92□□□□□ -0.66
HCFC1-202ENST00000369984 IGHV3OR15-7A0A075B7D8 119 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 CDIPTO14735 213 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 CD3EP07766 207 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 PTP4A1Q93096 173 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 VSTM2LQ96N03 204 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 CITED1Q99966 193 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 PAXXQ9BUH6 204 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 SGMS2Q8NHU3 365 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 CLN8Q9UBY8 286 aa10.92□□□□□ -0.66
HCFC1-202ENST00000369984 ZNF98A6NK75 572 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 MOGAT3Q86VF5 341 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 LSM6P62312 80 aaKnown RBP10.91□□□□□ -0.66
HCFC1-202ENST00000369984 CCL28Q9NRJ3 127 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 HIGD1AQ9Y241 93 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 IGHV3-21A0A0B4J1V1 117 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 CTXND1A0A1B0GTU2 59 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 RCC1P18754 421 aaPredicted RBP10.91□□□□□ -0.66
HCFC1-202ENST00000369984 CADM4Q8NFZ8 388 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 IL19Q9UHD0 177 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 SYNGR1O43759 233 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 DMKNQ6E0U4 476 aaPredicted RBP10.91□□□□□ -0.66
HCFC1-202ENST00000369984 GLRX2Q9NS18 164 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 RCC2Q9P258 522 aaKnown RBP10.91□□□□□ -0.66
HCFC1-202ENST00000369984 TBX21Q9UL17 535 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 OGG1O15527 345 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 CT62P0C5K7 136 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 CTSSP25774 331 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 MPLP40238 635 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 MGAT2Q10469 447 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 SAPCD1Q5SSQ6 148 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 ZNF441Q8N8Z8 693 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 SLC52A3Q9NQ40 469 aa10.91□□□□□ -0.66
HCFC1-202ENST00000369984 MFAP2P55001 183 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 MAJINQ3KP22 176 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 CYB561D1Q8N8Q1 229 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 GUCD1Q96NT3 240 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 SOSTQ9BQB4 213 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 HMGA2P52926 109 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 ZNF345Q14585 488 aa10.9□□□□□ -0.66
HCFC1-202ENST00000369984 RNFT1Q5M7Z0 435 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms