RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 ZNF709Q8N972 641 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 LSM10Q969L4 123 aaKnown RBP13.78□□□□□ -0.2
CHD1L-203ENST00000369259 UQCR10Q9UDW1 63 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 IGKV1-6A0A0C4DH72 117 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 H3BMH7 237 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 NAPSAO96009 420 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 CTXN2P0C2S0 81 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 CRYGSP22914 178 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 MPLP40238 635 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 UBE2V1Q13404 147 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 BATF2Q8N1L9 274 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 TMEM54Q969K7 222 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 RNF2Q99496 336 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 SAMD10Q9BYL1 202 aa13.78□□□□□ -0.2
CHD1L-203ENST00000369259 KIR2DS1A0A191URI9 304 aa13.77□□□□□ -0.21
CHD1L-203ENST00000369259 AQP7O14520 342 aa13.77□□□□□ -0.21
CHD1L-203ENST00000369259 KRASP01116 189 aa13.77□□□□□ -0.21
CHD1L-203ENST00000369259 C1QTNF9P0C862 333 aa13.77□□□□□ -0.21
CHD1L-203ENST00000369259 KIR2DS4P43632 304 aa13.77□□□□□ -0.21
CHD1L-203ENST00000369259 KIR2DS1Q14954 304 aa13.77□□□□□ -0.21
CHD1L-203ENST00000369259 RABEPKQ7Z6M1 372 aa13.77□□□□□ -0.21
CHD1L-203ENST00000369259 RPP25Q9BUL9 199 aaKnown RBP13.77□□□□□ -0.21
CHD1L-203ENST00000369259 ZNF552Q9H707 407 aaPredicted RBP13.77□□□□□ -0.21
CHD1L-203ENST00000369259 LAMTOR2Q9Y2Q5 125 aa13.77□□□□□ -0.21
CHD1L-203ENST00000369259 DHHO43323 396 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 BPIFB3P59826 476 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 SUMO1P63165 101 aaKnown RBP13.76□□□□□ -0.21
CHD1L-203ENST00000369259 SPATA45Q537H7 98 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 ETFRF1Q6IPR1 90 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 C1orf174Q8IYL3 243 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 ZNF784Q8NCA9 323 aaPredicted RBP13.76□□□□□ -0.21
CHD1L-203ENST00000369259 OR1K1Q8NGR3 316 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 SFRP2Q96HF1 295 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 STRADBQ9C0K7 418 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 KNL1Q8NG31 2342 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 CEACAM8P31997 349 aaPredicted RBP13.76□□□□□ -0.21
CHD1L-203ENST00000369259 MLF1P58340 268 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 ATP6V1FQ16864 119 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 OR8G2PQ6IF36 304 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 BAGE3Q86Y29 109 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 BAGE2Q86Y30 109 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 OR1L6Q8NGR2 347 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 OR5P3Q8WZ94 311 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 ALKBH3Q96Q83 286 aaPredicted RBP13.76□□□□□ -0.21
CHD1L-203ENST00000369259 CHRNA10Q9GZZ6 450 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 FBXL7Q9UJT9 491 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 C2orf16Q68DN1 1984 aa13.76□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A10PA6NDY2 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A18PA6NE21 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A16PA6NEW6 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A20PA6NIJ5 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A8PA6NJQ4 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A7PA6NKC0 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A22PA8MWA6 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A12PA8MX19 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A5PA8MXJ8 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A23PA8MXZ1 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 DIRC3C9JPN6 131 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 PDE6DO43924 150 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 CBR3O75828 277 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 MMP23AO75900 390 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 TOMM40O96008 361 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 IGKV1-39P01597 117 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 IGKV1D-39P04432 117 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A15PP0C7V4 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A13PP0C7W8 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A14PP0C7W9 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FAM90A24PP0C7X0 464 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 GNB1P62873 340 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 RIPPLY2Q5TAB7 128 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 ZNF468Q5VIY5 522 aaPredicted RBP13.75□□□□□ -0.21
CHD1L-203ENST00000369259 PLCXD3Q63HM9 321 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 Q8N976 141 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 TXN2Q99757 166 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 ALKBH7Q9BT30 221 aaPredicted RBP13.75□□□□□ -0.21
CHD1L-203ENST00000369259 GSX1Q9H4S2 264 aaPredicted RBP13.75□□□□□ -0.21
CHD1L-203ENST00000369259 A0A1W2PR80 420 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FASLGP48023 281 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 HNRNPA3P51991 378 aaKnown RBP13.75□□□□□ -0.21
CHD1L-203ENST00000369259 FFAR4Q5NUL3 377 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 RHBDD2Q6NTF9 364 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 Q6ZN92 141 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 SHISA6Q6ZSJ9 500 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 LYG1Q8N1E2 194 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 SIGLECL1Q8N7X8 197 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 ZNF611Q8N823 705 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 RNF138Q8WVD3 245 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 LRRC61Q9BV99 259 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 ZNF703Q9H7S9 590 aaPredicted RBP13.75□□□□□ -0.21
CHD1L-203ENST00000369259 ATP23Q9Y6H3 246 aa13.75□□□□□ -0.21
CHD1L-203ENST00000369259 MDFIC2A0A1B0GVS7 189 aa13.74□□□□□ -0.21
CHD1L-203ENST00000369259 IGLC2P0DOY2 106 aa13.74□□□□□ -0.21
CHD1L-203ENST00000369259 IGLC3P0DOY3 106 aa13.74□□□□□ -0.21
CHD1L-203ENST00000369259 EGR1P18146 543 aa13.74□□□□□ -0.21
CHD1L-203ENST00000369259 COX5AP20674 150 aa13.74□□□□□ -0.21
CHD1L-203ENST00000369259 HNF1AP20823 631 aa13.74□□□□□ -0.21
CHD1L-203ENST00000369259 CBLN1P23435 193 aa13.74□□□□□ -0.21
CHD1L-203ENST00000369259 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
CHD1L-203ENST00000369259 KRTDAPP60985 99 aa13.74□□□□□ -0.21
CHD1L-203ENST00000369259 PMP22Q01453 160 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms