RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 KLF13Q9Y2Y9 288 aaPredicted RBP9.82□□□□□ -0.84
USF1-201ENST00000368019 UBE2J1Q9Y385 318 aaPredicted RBP9.82□□□□□ -0.84
USF1-201ENST00000368019 MMP24Q9Y5R2 645 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 ALPK2Q86TB3 2170 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 NAV3Q8IVL0 2385 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 ARHGAP21Q5T5U3 1957 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 TRBV6-6A0A0A6YYG2 114 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 IGKV1-12A0A0C4DH73 117 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 KLRC4-KLRK1H3BQV0 150 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 PPP1R2P9O14990 202 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 CYB5R3P00387 301 aaPredicted RBP9.81□□□□□ -0.84
USF1-201ENST00000368019 IGKV1D-12P01611 117 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 PAX1P15863 534 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 S100GP29377 79 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 NDUFA6P56556 154 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 DLK1P80370 383 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 ZNF674Q2M3X9 581 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 NCMAPQ5T1S8 102 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 HIST3H2BBQ8N257 126 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 ZIC4Q8N9L1 334 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 OR5R1Q8NH85 324 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 Q8WTZ3 238 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 CPNE4Q96A23 557 aaPredicted RBP9.81□□□□□ -0.84
USF1-201ENST00000368019 FBXO17Q96EF6 278 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 ZNF385AQ96PM9 386 aaKnown RBP9.81□□□□□ -0.84
USF1-201ENST00000368019 RARRES2Q99969 163 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 PRDM14Q9GZV8 571 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 Q9N2K0 584 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 ST3GAL6Q9Y274 331 aa9.81□□□□□ -0.84
USF1-201ENST00000368019 HRNRQ86YZ3 2850 aaPredicted RBP9.81□□□□□ -0.84
USF1-201ENST00000368019 PRRC2AP48634 2157 aaKnown RBP9.8□□□□□ -0.84
USF1-201ENST00000368019 ACANP16112 2415 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 A0A1B0GU03 582 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 IFITM10A6NMD0 228 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 CLDN34H7C241 214 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 GEMIN2O14893 280 aaKnown RBP9.8□□□□□ -0.84
USF1-201ENST00000368019 SPRY1O43609 319 aaPredicted RBP9.8□□□□□ -0.84
USF1-201ENST00000368019 ANGPTL7O43827 346 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 HIST1H2BKO60814 126 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 NAPSAO96009 420 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 OPN1MWP04001 364 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 TK1P04183 234 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 HIST1H2BJP06899 126 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 DBHP09172 617 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 OPN1MW2P0DN77 364 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 OPN1MW3P0DN78 364 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 HIST1H2BOP23527 126 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 GNRHRP30968 328 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 HIST1H2BBP33778 126 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 HAAOP46952 286 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 HIST1H2BDP58876 126 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 PKIAP61925 76 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 RPL23AP62750 156 aaKnown RBP9.8□□□□□ -0.84
USF1-201ENST00000368019 HIST1H2BCP62807 126 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 NKX6-1P78426 367 aaPredicted RBP9.8□□□□□ -0.84
USF1-201ENST00000368019 DEFA6Q01524 100 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 HIST2H2BEQ16778 126 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.8□□□□□ -0.84
USF1-201ENST00000368019 CLEC9AQ6UXN8 241 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 REC114Q7Z4M0 266 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 TBC1D26Q86UD7 250 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 OR5C1Q8NGR4 320 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 OR11L1Q8NGX0 322 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 OR2V1Q8NHB1 315 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 AKR7LQ8NHP1 331 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 RNASEH2CQ8TDP1 164 aaKnown RBP9.8□□□□□ -0.84
USF1-201ENST00000368019 TMEM171Q8WVE6 324 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 HIST1H2BHQ93079 126 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 HIST1H2BNQ99877 126 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 HIST1H2BMQ99879 126 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 RBM24Q9BX46 236 aaKnown RBP9.8□□□□□ -0.84
USF1-201ENST00000368019 SH2D2AQ9NP31 389 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 DEPPQ9NTK1 212 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 UFSP2Q9NUQ7 469 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 LIPGQ9Y5X9 500 aa9.8□□□□□ -0.84
USF1-201ENST00000368019 OR5H1A6NKK0 313 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 NPIPB11E5RHQ5 1161 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 IFNA1P01562 189 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 IFNA5P01569 189 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 LCATP04180 440 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 CXCL1P09341 107 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 DYNLT3P51808 116 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 RAC3P60763 192 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 CCL20P78556 96 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 SERF2P84101 59 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 ZNF92Q03936 586 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 COA6Q5JTJ3 125 aaKnown RBP9.79□□□□□ -0.84
USF1-201ENST00000368019 TSPO2Q5TGU0 170 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 FAM90A2PQ658T7 463 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 STX12Q86Y82 276 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 ODF3L1Q8IXM7 274 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 CMTM1Q8IZ96 169 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 RPRMLQ8N4K4 120 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 LSM10Q969L4 123 aaKnown RBP9.79□□□□□ -0.84
USF1-201ENST00000368019 PYGO2Q9BRQ0 406 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 AGMATQ9BSE5 352 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 PRDM13Q9H4Q3 707 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 ZNF442Q9H7R0 627 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 ZDHHC11Q9H8X9 412 aa9.79□□□□□ -0.84
USF1-201ENST00000368019 CDH20Q9HBT6 801 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms