RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 IGKV3D-15A0A087WSY6 115 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 PIN1P1O15428 100 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 IGKV3-15P01624 115 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 ABHD14BQ96IU4 210 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 C7orf69Q9H7B7 122 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 SCN5AQ14524 2016 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 CGB1A6NKQ9 187 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 UNQ5815/PRO19632Q6UWF5 114 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 FAM219AQ8IW50 185 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 ZCCHC24Q8N2G6 241 aaKnown RBP9.97□□□□□ -0.81
SYNE1-204ENST00000367248 MRGPRFQ96AM1 343 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 LMX1BO60663 402 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 TMEM33P57088 247 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 TPPP2P59282 170 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 SNAI3Q3KNW1 292 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 TIMM23BQ5SRD1 257 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 FDX2Q6P4F2 183 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 SEC14L6B5MCN3 397 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 K7N7A8 449 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 HPXP02790 462 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 FCER1GP30273 86 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 ZNF426Q9BUY5 554 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 TLNRD1Q9H1K6 362 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 PPP1R3EQ9H7J1 279 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 APOBEC3AP31941 199 aaPredicted RBP9.96□□□□□ -0.81
SYNE1-204ENST00000367248 NCR3LG1Q68D85 454 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 BTNL8Q6UX41 500 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 SEZ6L2Q6UXD5 910 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 PNKDQ8N490 385 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 FADS6Q8N9I5 356 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 FAM222BQ8WU58 562 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 RHOFQ9HBH0 211 aa9.96□□□□□ -0.81
SYNE1-204ENST00000367248 PPP1R2P9O14990 202 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 RNF224P0DH78 156 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 OR4D10Q8NGI6 311 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 OR10Z1Q8NGY1 313 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 OR4C12Q96R67 309 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 ABCA4P78363 2273 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 C1QTNF9BB2RNN3 333 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 CHST1O43916 411 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 SCGB1D1O95968 90 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 C1QTNF9P0C862 333 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 NTF3P20783 257 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 HCP5Q6MZN7 132 aa9.96□□□□□ -0.82
SYNE1-204ENST00000367248 DAOP14920 347 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 P2RY1P47900 373 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 CDC34P49427 236 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-204ENST00000367248 C11orf42Q8N5U0 333 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 BRCA1P38398 1863 aaKnown RBP9.95□□□□□ -0.82
SYNE1-204ENST00000367248 HBZP02008 142 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 PJVKQ0ZLH3 352 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 OVCH2Q7RTZ1 564 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 SSMEM1Q8WWF3 244 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 UFC1Q9Y3C8 167 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 GOLT1BQ9Y3E0 138 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 SPP1P10451 314 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 DHRS7BQ6IAN0 325 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-204ENST00000367248 TEX261Q6UWH6 196 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 LYZL2Q7Z4W2 148 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 DPH3Q96FX2 82 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 NKX6-2Q9C056 277 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-204ENST00000367248 METTL1Q9UBP6 276 aaKnown RBP9.95□□□□□ -0.82
SYNE1-204ENST00000367248 KCNK7Q9Y2U2 307 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 U3KQ87 197 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 THADAQ6YHU6 1953 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 HLA-DQB1P01920 261 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 ERVS71-1P61550 626 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 OR1L8Q8NGR8 309 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 CABLES2Q9BTV7 478 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 ALX4Q9H161 411 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-204ENST00000367248 DOCK8Q8NF50 2099 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 DIDO1Q9BTC0 2240 aaKnown RBP9.95□□□□□ -0.82
SYNE1-204ENST00000367248 TRPM7Q96QT4 1865 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 LYNX1G3V0Z9 82 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 RAB29O14966 203 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 ADRB1P08588 477 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 LYNX1P0DP58 116 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 TEX29Q8N6K0 151 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 PLAURQ03405 335 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 OR10G4Q8NGN3 311 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 OR10G9Q8NGN4 311 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 OR10G7Q8NGN6 311 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 Q8WTZ3 238 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 WSB1Q9Y6I7 421 aa9.95□□□□□ -0.82
SYNE1-204ENST00000367248 SPTBN1Q01082 2364 aaKnown RBP9.94□□□□□ -0.82
SYNE1-204ENST00000367248 ODAMA1E959 279 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 B9A039 149 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 GAPDHP04406 335 aaKnown RBP9.94□□□□□ -0.82
SYNE1-204ENST00000367248 GLRXP35754 106 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 VAX1Q5SQQ9 334 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 C9orf106Q8NAJ2 232 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 DUX5Q96PT3 197 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 TCAPO15273 167 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 GUK1Q16774 197 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 Q71RC1 249 aaPredicted RBP9.94□□□□□ -0.82
SYNE1-204ENST00000367248 STARD4Q96DR4 205 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 TUBA4BQ9H853 241 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 LOC390937A0A1W2PQ73 354 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 HMSDA8MTL9 139 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 PSG2P11465 335 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms