RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 CTSSP25774 331 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 DCAF12L2Q5VW00 463 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZBTB34Q8NCN2 500 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 WNT2BQ93097 391 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 GFI1Q99684 422 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 MRPS18CQ9Y3D5 142 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 PLXNA4Q9HCM2 1894 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 NCBP2LA6PVI3 153 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 PRSS1P07477 247 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 PRDX4Q13162 271 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 SP6Q3SY56 376 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 SAXO1Q8IYX7 474 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 TMEM38BQ9NVV0 291 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 GNG7O60262 68 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 ACTL6AO96019 429 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 TRGC1P0CF51 173 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 SCGB1D4Q6XE38 83 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 SSX8Q7RTT4 187 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 C20orf196Q8IYI0 205 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 FBXL14Q8N1E6 418 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 GLRX2Q9NS18 164 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 DOK5Q9P104 306 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZDHHC8Q9ULC8 765 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 LHFPL6Q9Y693 200 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM221AA4D161 298 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 C21orf140B9A014 251 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 P2RY4P51582 365 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 WIPI1Q5MNZ9 446 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 TMEM116Q8NCL8 245 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 APCDD1LQ8NCL9 501 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 NFAM1Q8NET5 270 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 ROBO4Q8WZ75 1007 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 PMCHL2Q9BQD1 86 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 OCIAD1Q9NX40 245 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 P4HTMQ9NXG6 502 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 RCC2Q9P258 522 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 INTS1Q8N201 2190 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM186AA6NE01 2351 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 A0A1B0GTI1 187 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 EPOPA6NHQ4 379 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 B4GALT1P15291 398 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 NMUP48645 174 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 BATF2Q8N1L9 274 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC25A45Q8N413 288 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 DERL1Q9BUN8 251 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 A8MXK9 166 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 C11orf94C9JXX5 98 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 PDE6DO43924 150 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 CSN3P07498 182 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 VDAC1P21796 283 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 NPY1RP25929 384 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 HERVK_113P61574 105 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 SRSF4Q08170 494 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 SRSF9Q13242 221 aaKnown RBP eCLIP4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZNF774Q6NX45 483 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR8A1Q8NGG7 326 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR13G1Q8NGZ3 307 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 NUDT11Q96G61 164 aa4.67□□□□□ -1.66
CDC42BPA-204ENST00000366767 CORTO00230 105 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 MYF5P13349 255 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 CCL1P22362 96 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 ACSM6Q6P461 480 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 TMEM183AQ8IXX5 376 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM169BQ8N8A8 192 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 TRDCB7Z8K6 153 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 TIMM8AO60220 97 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 TCL1AP56279 114 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 EDDM3BP56851 147 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC35E4Q6ICL7 350 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 FAM166AQ6J272 317 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC25A34Q6PIV7 304 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 VHLLQ6RSH7 139 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 WDFY1Q8IWB7 410 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 FADS6Q8N9I5 356 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR10S1Q8NGN2 331 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 HEXA-AS1Q9H8Q6 139 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC45A2Q9UMX9 530 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 SLC25A5P05141 298 aaKnown RBP4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 ADH4P08319 380 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 SFTPCP11686 197 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 DEFA4P12838 97 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 CEBPDP49716 269 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 NRN1LQ496H8 165 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 OR10V1Q8NGI7 309 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 SARAFQ96BY9 339 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 TWSG1Q9GZX9 223 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 GPR35Q9HC97 309 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 HES4Q9HCC6 221 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 CRYM-AS1A6NIL9 109 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 KHDC3LQ587J8 217 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 C9orf135Q5VTT2 229 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 PMS2CLQ68D20 193 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 MRGPRGQ86SM5 289 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 ATRXP46100 2492 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 DNASE2O00115 360 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 TSPAN13O95857 204 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 PPYP01298 95 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 NPBWR2P48146 333 aa4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 ZNF816Q0VGE8 651 aaPredicted RBP4.66□□□□□ -1.66
CDC42BPA-204ENST00000366767 MRPL54Q6P161 138 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms