RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 AADACL3Q5VUY0 350 aa16.94■□□□□ 0.3
SHISA4-201ENST00000362011 PLET1Q6UQ28 207 aa16.94■□□□□ 0.3
SHISA4-201ENST00000362011 CCBE1Q6UXH8 406 aaPredicted RBP16.94■□□□□ 0.3
SHISA4-201ENST00000362011 CENPSQ8N2Z9 138 aa16.94■□□□□ 0.3
SHISA4-201ENST00000362011 OR10V1Q8NGI7 309 aa16.94■□□□□ 0.3
SHISA4-201ENST00000362011 MOB3AQ96BX8 217 aa16.94■□□□□ 0.3
SHISA4-201ENST00000362011 FXYD6Q9H0Q3 95 aa16.94■□□□□ 0.3
SHISA4-201ENST00000362011 RDH8Q9NYR8 311 aa16.94■□□□□ 0.3
SHISA4-201ENST00000362011 OR2W1Q9Y3N9 320 aa16.94■□□□□ 0.3
SHISA4-201ENST00000362011 WNK2Q9Y3S1 2297 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 INAFM1C9JVW0 142 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 M0R1W7 72 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 YPEL1O60688 119 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 MMP23AO75900 390 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 PPP1CCP36873 323 aaKnown RBP16.93■□□□□ 0.3
SHISA4-201ENST00000362011 FXYD4P59646 89 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 KIR3DL3Q8N743 410 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 MARCH1Q8TCQ1 289 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 MRGPRFQ96AM1 343 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 YPEL2Q96QA6 119 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 REG4Q9BYZ8 158 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 C20orf85Q9H1P6 137 aa16.93■□□□□ 0.3
SHISA4-201ENST00000362011 RNF223E7ERA6 249 aa16.92■□□□□ 0.3
SHISA4-201ENST00000362011 SMAD7O15105 426 aaKnown RBP16.92■□□□□ 0.3
SHISA4-201ENST00000362011 IGHV1-8P0DP01 117 aa16.92■□□□□ 0.3
SHISA4-201ENST00000362011 PGAM2P15259 253 aa16.92■□□□□ 0.3
SHISA4-201ENST00000362011 PAX2Q02962 417 aa16.92■□□□□ 0.3
SHISA4-201ENST00000362011 MORN2Q502X0 79 aa16.92■□□□□ 0.3
SHISA4-201ENST00000362011 FAM53AQ6NSI3 398 aaPredicted RBP16.92■□□□□ 0.3
SHISA4-201ENST00000362011 ZDHHC22Q8N966 263 aa16.92■□□□□ 0.3
SHISA4-201ENST00000362011 EDARADDQ8WWZ3 215 aa16.92■□□□□ 0.3
SHISA4-201ENST00000362011 TOMM40LQ969M1 308 aa16.92■□□□□ 0.3
SHISA4-201ENST00000362011 DACT3Q96B18 629 aaPredicted RBP16.92■□□□□ 0.3
SHISA4-201ENST00000362011 SCGB3A2Q96PL1 93 aa16.92■□□□□ 0.3
SHISA4-201ENST00000362011 SESN1Q9Y6P5 492 aa16.92■□□□□ 0.3
SHISA4-201ENST00000362011 ANK3Q12955 4377 aaKnown RBP16.92■□□□□ 0.3
SHISA4-201ENST00000362011 COL6A5A8TX70 2615 aa16.91■□□□□ 0.3
SHISA4-201ENST00000362011 LUMP51884 338 aaPredicted RBP16.91■□□□□ 0.3
SHISA4-201ENST00000362011 UCP3P55916 312 aa16.91■□□□□ 0.3
SHISA4-201ENST00000362011 ERVFRD-1P60508 538 aa16.91■□□□□ 0.3
SHISA4-201ENST00000362011 SURF2Q15527 256 aaPredicted RBP16.91■□□□□ 0.3
SHISA4-201ENST00000362011 LY6G6FQ5SQ64 297 aa16.91■□□□□ 0.3
SHISA4-201ENST00000362011 BTNL3Q6UXE8 466 aa16.91■□□□□ 0.3
SHISA4-201ENST00000362011 C11orf42Q8N5U0 333 aa16.91■□□□□ 0.3
SHISA4-201ENST00000362011 C1orf159Q96HA4 380 aa16.91■□□□□ 0.3
SHISA4-201ENST00000362011 MMP28Q9H239 520 aa16.91■□□□□ 0.3
SHISA4-201ENST00000362011 LPAR2Q9HBW0 351 aa16.91■□□□□ 0.3
SHISA4-201ENST00000362011 NUDT15Q9NV35 164 aa16.91■□□□□ 0.3
SHISA4-201ENST00000362011 RBM7Q9Y580 266 aaKnown RBP16.91■□□□□ 0.3
SHISA4-201ENST00000362011 TRAV6A0A075B6T7 132 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 ARPC1BO15143 372 aaKnown RBP16.9■□□□□ 0.3
SHISA4-201ENST00000362011 H2AFB2P0C5Z0 115 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 ARF6P62330 175 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 FAM216AQ8WUB2 273 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 SECTM1Q8WVN6 248 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 CREB3L1Q96BA8 519 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 UPRTQ96BW1 309 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 SUCNR1Q9BXA5 334 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 SLC5A7Q9GZV3 580 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 PARP12Q9H0J9 701 aaKnown RBP16.9■□□□□ 0.3
SHISA4-201ENST00000362011 MMP26Q9NRE1 261 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 VSIG4Q9Y279 399 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 KPTNQ9Y664 436 aa16.9■□□□□ 0.3
SHISA4-201ENST00000362011 IGKV1D-13A0A0B4J2D9 117 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 B4DSR2 109 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 ITGB1BP1O14713 200 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 MSMBP08118 114 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 IGKV1-13P0DP09 117 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 DVL1P1P54792 670 aaPredicted RBP16.89■□□□□ 0.29
SHISA4-201ENST00000362011 KRTAP1-1Q07627 177 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 Q3ZCU0 254 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 LPCAT3Q6P1A2 487 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 OR2AK2Q8NG84 335 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 ZFAND1Q8TCF1 268 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 LEAP2Q969E1 77 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 MARVELD1Q9BSK0 173 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 GPR132Q9UNW8 380 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 FLVCR2Q9UPI3 526 aa16.89■□□□□ 0.29
SHISA4-201ENST00000362011 A0A087X0M5 115 aa16.88■□□□□ 0.29
SHISA4-201ENST00000362011 A0A1B0GX30 115 aa16.88■□□□□ 0.29
SHISA4-201ENST00000362011 RLN1P04808 185 aa16.88■□□□□ 0.29
SHISA4-201ENST00000362011 GNG10P50151 68 aa16.88■□□□□ 0.29
SHISA4-201ENST00000362011 BAMBIQ13145 260 aa16.88■□□□□ 0.29
SHISA4-201ENST00000362011 C1orf122Q6ZSJ8 110 aa16.88■□□□□ 0.29
SHISA4-201ENST00000362011 SLC38A6Q8IZM9 456 aa16.88■□□□□ 0.29
SHISA4-201ENST00000362011 Q8N7P7 452 aa16.88■□□□□ 0.29
SHISA4-201ENST00000362011 TMEM133Q9H2Q1 129 aa16.88■□□□□ 0.29
SHISA4-201ENST00000362011 C14orf166Q9Y224 244 aaKnown RBP16.88■□□□□ 0.29
SHISA4-201ENST00000362011 INSIG2Q9Y5U4 225 aa16.88■□□□□ 0.29
SHISA4-201ENST00000362011 ATRQ13535 2644 aa16.88■□□□□ 0.29
SHISA4-201ENST00000362011 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.88■□□□□ 0.29
SHISA4-201ENST00000362011 INMT-MINDY4F8WBC2 141 aa16.87■□□□□ 0.29
SHISA4-201ENST00000362011 CRLF1O75462 422 aa16.87■□□□□ 0.29
SHISA4-201ENST00000362011 IGHV3-7P01780 117 aa16.87■□□□□ 0.29
SHISA4-201ENST00000362011 CTSDP07339 412 aaPredicted RBP16.87■□□□□ 0.29
SHISA4-201ENST00000362011 OR8U9P0C7N5 309 aa16.87■□□□□ 0.29
SHISA4-201ENST00000362011 CD34P28906 385 aa16.87■□□□□ 0.29
SHISA4-201ENST00000362011 RAB7AP51149 207 aa16.87■□□□□ 0.29
SHISA4-201ENST00000362011 METTL11BQ5VVY1 283 aa16.87■□□□□ 0.29
SHISA4-201ENST00000362011 LDLRAD3Q86YD5 345 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms