RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TEPPQ6URK8 271 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 OR4A5Q8NH83 315 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 C2orf88Q9BSF0 95 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 HLA-DRB1P01911 266 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 SRD5A2P31213 254 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 SELENOTP62341 195 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 HTN1P15515 57 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 WNT2BQ93097 391 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 ARRDC1-AS1Q9H2J1 176 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 ASCL3Q9NQ33 180 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 ZNF815PA8K554 130 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 RABAC1Q9UI14 185 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 CCL26Q9Y258 94 aa11.62□□□□□ -0.55
SRGAP3-201ENST00000360413 A0A1B0GU03 582 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 PLA2G10O15496 165 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 KBTBD11O94819 623 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 PRNTQ86SH4 94 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 CRYGNQ8WXF5 182 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 ATP6V0CP27449 155 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 MIXL1Q9H2W2 232 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 LPAR2Q9HBW0 351 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 SLC6A13Q9NSD5 602 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 MRPL16Q9NX20 251 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 PHLDA3Q9Y5J5 127 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 KLK2P20151 261 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 CDKN2AP42771 156 aaKnown RBP11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 ZNF441Q8N8Z8 693 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 ZNF665Q9H7R5 613 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 ZNF275Q9NSD4 429 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 WDR25Q64LD2 544 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 J3KRW8 73 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 PRKNO60260 465 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 PABPC1L2AQ5JQF8 200 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 PAQR9Q6ZVX9 377 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 CLN8Q9UBY8 286 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 ASPDHA6ND91 283 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 FOXC1Q12948 553 aa11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 BEX4Q9NWD9 120 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-201ENST00000360413 FAM90A27PA6NNH2 459 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 FZD5Q13467 585 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 C10orf128Q5T292 105 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 PWWP2BQ6NUJ5 590 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 R3HDM4Q96D70 268 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 GEMIN7Q9H840 131 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 GPR27Q9NS67 375 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 STRCQ7RTU9 1775 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 LRRC29Q8WV35 223 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 LSM10Q969L4 123 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 NUDT11Q96G61 164 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 RAX2Q96IS3 184 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 SF3B5Q9BWJ5 86 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 ZFP64Q9NPA5 681 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 CLDN16Q9Y5I7 305 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 HLA-DQA1P01909 254 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 LSM6P62312 80 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 TMSB15BA0A087X1C1 80 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 PRSS2P07478 247 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 NAAAQ02083 359 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 RFESDQ8TAC1 157 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 ANAPC13Q9BS18 74 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 TRAV8-7A0A075B6U6 113 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 A0A1B0GTH9 108 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 H7C1H1 209 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 AMY1AP04745 511 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 MRPS11P82912 194 aaKnown RBP11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 OR4C13Q8NGP0 309 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 IGHV3-43A0A0B4J1X8 118 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 MOSPD3O75425 235 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 MT-CO3P00414 261 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 IGHV3-43DP0DP04 118 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 FGF5P12034 268 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 PAPPA2Q9BXP8 1791 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 METTL12A8MUP2 240 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 CTSSP25774 331 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 SERF2P84101 59 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 PRSS8Q16651 343 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 OR1K1Q8NGR3 316 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 KIR2DL4Q99706 377 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 DNAJC4Q9NNZ3 241 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 HIGD1AQ9Y241 93 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 TMEM56-RWDD3S4R434 201 aa11.6□□□□□ -0.55
SRGAP3-201ENST00000360413 COX7A1P24310 79 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 CKS2P33552 79 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 HMGA2P52926 109 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 SNRPD3P62318 126 aaKnown RBP11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 HES3Q5TGS1 186 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 FGF22Q9HCT0 170 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 C1QTNF9BB2RNN3 333 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 MC5RP33032 325 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 ZNF124Q15973 351 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 PARLQ9H300 379 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 ZNF770Q6IQ21 691 aaPredicted RBP11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 ST6GALNAC3Q8NDV1 305 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 OR6X1Q8NH79 312 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 MRPL24Q96A35 216 aaKnown RBP11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 HARBI1Q96MB7 349 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 A0A1B0GWB2 263 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 NKX2-6A6NCS4 301 aa11.59□□□□□ -0.55
SRGAP3-201ENST00000360413 IBA57Q5T440 356 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms