RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 RBPJQ06330 500 aa15.32■□□□□ 0.04
PDLIM7-203ENST00000359895 ZNF266Q14584 549 aa15.32■□□□□ 0.04
PDLIM7-203ENST00000359895 SWI5Q1ZZU3 235 aa15.32■□□□□ 0.04
PDLIM7-203ENST00000359895 PXDC1Q5TGL8 231 aa15.32■□□□□ 0.04
PDLIM7-203ENST00000359895 TMEM108Q6UXF1 575 aa15.32■□□□□ 0.04
PDLIM7-203ENST00000359895 CLEC9AQ6UXN8 241 aa15.32■□□□□ 0.04
PDLIM7-203ENST00000359895 MOGAT3Q86VF5 341 aa15.32■□□□□ 0.04
PDLIM7-203ENST00000359895 GCSAMQ8N6F7 178 aa15.32■□□□□ 0.04
PDLIM7-203ENST00000359895 TCTEX1D1Q8N7M0 179 aa15.32■□□□□ 0.04
PDLIM7-203ENST00000359895 PARP12Q9H0J9 701 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-203ENST00000359895 IGKV1D-17A0A075B6S4 117 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 IGSF23A1L1A6 192 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 MGST3O14880 152 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 SPRY3O43610 288 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 LHBP01229 141 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 SPP1P10451 314 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 GZMHP20718 246 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 EPHA1P21709 976 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 TNFSF4P23510 183 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 PTAFRP25105 342 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 RAB5CP51148 216 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 CATR1Q13166 79 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 TMEM252Q8N6L7 170 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 OR52L2PQ8NGH6 319 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 OR13A1Q8NGR1 328 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 ITLN1Q8WWA0 313 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 RAB40CQ96S21 281 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 MRPL37Q9BZE1 423 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 MAGT1Q9H0U3 335 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 OR2D2Q9H210 308 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 IL19Q9UHD0 177 aa15.31■□□□□ 0.04
PDLIM7-203ENST00000359895 A0A0G2JRQ6 117 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 CHST1O43916 411 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 IGKV1-39P01597 117 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 TFF1P04155 84 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 IGKV1D-39P04432 117 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 CCKARP32238 428 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 LPAR6P43657 344 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 AKR1C2P52895 323 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 F2RL1P55085 397 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 RPL23AP62750 156 aaKnown RBP15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 ZNF585BQ52M93 769 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 ZGRF1Q86YA3 2104 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 NCOR1P1Q9H4R4 102 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 JKAMPQ9P055 326 aa15.3■□□□□ 0.04
PDLIM7-203ENST00000359895 ATG12O94817 140 aa15.29■□□□□ 0.04
PDLIM7-203ENST00000359895 HOXA4Q00056 320 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-203ENST00000359895 CR1LQ2VPA4 569 aa15.29■□□□□ 0.04
PDLIM7-203ENST00000359895 BTNL8Q6UX41 500 aa15.29■□□□□ 0.04
PDLIM7-203ENST00000359895 BOLLQ8N9W6 283 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-203ENST00000359895 ZCCHC14Q8WYQ9 949 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-203ENST00000359895 NARS2Q96I59 477 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-203ENST00000359895 HRH4Q9H3N8 390 aa15.29■□□□□ 0.04
PDLIM7-203ENST00000359895 STRAPQ9Y3F4 350 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-203ENST00000359895 RNF115Q9Y4L5 304 aa15.29■□□□□ 0.04
PDLIM7-203ENST00000359895 EPG5Q9HCE0 2579 aa15.29■□□□□ 0.04
PDLIM7-203ENST00000359895 ODAMA1E959 279 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 TMEM218A2RU14 115 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 APOC3P02656 99 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 DANCRP0C864 163 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 UCNP55089 124 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 TMPRSS3P57727 454 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 TNFAIP6P98066 277 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 EIF4EBP1Q13541 118 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 Q6ZRG5 221 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 SPAG16Q8N0X2 631 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 FAM222BQ8WU58 562 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 EDARADDQ8WWZ3 215 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 SNRNP40Q96DI7 357 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 RAB9BQ9NP90 201 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 RNF7Q9UBF6 113 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 CACNG5Q9UF02 275 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 CFAP47Q6ZTR5 3102 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 TMEM8BA6NDV4 472 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 FAM90A26D6RGX4 464 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 C15orf65H3BRN8 121 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 IGKV1-5P01602 117 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 SSTR5P35346 364 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 PPP1CCP36873 323 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 EDDM3AQ14507 147 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 ZNF66Q6ZN08 573 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 COA4Q9NYJ1 87 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 PLA2G2EQ9NZK7 142 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 RNF150Q9ULK6 438 aa15.28■□□□□ 0.04
PDLIM7-203ENST00000359895 ANKRD11Q6UB99 2663 aaPredicted RBP15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 KIAA1324LA8MWY0 1029 aaPredicted RBP15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 K7N7A8 449 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 IGHV1-46P01743 117 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 PAX9P55771 341 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 C22orf34Q6ZV56 151 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 STX12Q86Y82 276 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 COMMD1Q8N668 190 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 TPRX1Q8N7U7 411 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 LYPD6BQ8NI32 183 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 DIRC2Q96SL1 478 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 JPT1Q9UK76 154 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 TMA7Q9Y2S6 64 aaKnown RBP15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 RAXQ9Y2V3 346 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 MMP24Q9Y5R2 645 aa15.27■□□□□ 0.03
PDLIM7-203ENST00000359895 WSB1Q9Y6I7 421 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms