RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ZNF324O75467 553 aaPredicted RBP7.69□□□□□ -1.18
COL6A6-201ENST00000358511 CA3P07451 260 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 RND3P61587 244 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 HERPUD1Q15011 391 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 OR8I2Q8N0Y5 310 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 SPAG8Q99932 426 aaPredicted RBP7.69□□□□□ -1.18
COL6A6-201ENST00000358511 SH3BGRL3Q9H299 93 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 OOEPA6NGQ2 149 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 PRRT4C9JH25 899 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 NDUFB4O95168 129 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 HLA-DRB1P01911 266 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 CCL11P51671 97 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 LSM6P62312 80 aaKnown RBP7.69□□□□□ -1.18
COL6A6-201ENST00000358511 YBX1P67809 324 aaKnown RBP7.69□□□□□ -1.18
COL6A6-201ENST00000358511 OR8B3Q8NGG8 313 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 OR1L1Q8NH94 360 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 BADQ92934 168 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 ZNF665Q9H7R5 613 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 KCNMB2Q9Y691 235 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 ZGLP1P0C6A0 271 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 CD40P25942 277 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 RUNX1Q01196 453 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 GLRX5Q86SX6 157 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 TCF20Q9UGU0 1960 aaKnown RBP7.69□□□□□ -1.18
COL6A6-201ENST00000358511 TGIF1Q15583 401 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 IBA57Q5T440 356 aaKnown RBP7.69□□□□□ -1.18
COL6A6-201ENST00000358511 ZNF683Q8IZ20 524 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 UBALD1Q8TB05 177 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 RNF133Q8WVZ7 376 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 WBP2Q969T9 261 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 RBKSQ9H477 322 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 ANAPC1Q9H1A4 1944 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 DYSFO75923 2080 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 RPS11P62280 158 aaKnown RBP eCLIP7.68□□□□□ -1.18
COL6A6-201ENST00000358511 SLC35B1P78383 322 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 OR10AC1Q8NH08 325 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 SFRP2Q96HF1 295 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 FER1L6-AS2Q96M78 137 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 QTRT1Q9BXR0 403 aaKnown RBP7.68□□□□□ -1.18
COL6A6-201ENST00000358511 SLC52A3Q9NQ40 469 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 SIRT4Q9Y6E7 314 aaPredicted RBP7.68□□□□□ -1.18
COL6A6-201ENST00000358511 CA6P23280 308 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 TNFRSF9Q07011 255 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 PATE1Q8WXA2 126 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 FOXB1Q99853 325 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 SLC25A33Q9BSK2 321 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.68□□□□□ -1.18
COL6A6-201ENST00000358511 A8MWL6 223 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 M0R3E3 92 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 LMX1BO60663 402 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 STAG3L3P0CL85 134 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 ATG4DQ86TL0 474 aaPredicted RBP7.68□□□□□ -1.18
COL6A6-201ENST00000358511 APCDD1LQ8NCL9 501 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 C5orf66Q9H5L9 145 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 DPRXA6NFQ7 191 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 ORM2P19652 201 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 LCN2P80188 198 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 PDCD1Q15116 288 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 LINC01555Q8NAE3 123 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 TMEM140Q9NV12 185 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 LOC107984156A0A0G2JMH3 177 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 DEFB108AA8MXU0 73 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 CD74P04233 296 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 CEACAM5P06731 702 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 ARL17AQ8IVW1 177 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 MPZL1O95297 269 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 HBZP02008 142 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 NPBWR2P48146 333 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 SLC25A38Q96DW6 304 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 GALNT14Q96FL9 552 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 SGK494Q96LW2 274 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 TWSG1Q9GZX9 223 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 ZBTB34Q8NCN2 500 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 FLRT3Q9NZU0 649 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 METTL12A8MUP2 240 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 NDUFS8O00217 210 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 HOXA3O43365 443 aaPredicted RBP7.68□□□□□ -1.18
COL6A6-201ENST00000358511 C10orf113Q5VZT2 155 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 ATRAIDQ6UW56 229 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 LIMS2Q7Z4I7 341 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 LURAP1LQ8IV03 231 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 RLN3Q8WXF3 142 aa7.68□□□□□ -1.18
COL6A6-201ENST00000358511 C6orf106Q9H6K1 298 aaPredicted RBP7.68□□□□□ -1.18
COL6A6-201ENST00000358511 TRBV5-5A0A0J9YX44 114 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 A0A1W2PPC1 479 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 NPIPB7O75200 414 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 ACTL6AO96019 429 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 DUSP2Q05923 314 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 ADIPOQQ15848 244 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 SAMD13Q5VXD3 122 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 RSPO2Q6UXX9 243 aaPredicted RBP7.67□□□□□ -1.18
COL6A6-201ENST00000358511 VASH2Q86V25 355 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 GBGT1Q8N5D6 347 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 FAM206AQ9NX38 181 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 ZP1P60852 638 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 LINC00696Q6ZRV3 163 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 OR10S1Q8NGN2 331 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 TNRC6AQ8NDV7 1962 aaKnown RBP7.67□□□□□ -1.18
COL6A6-201ENST00000358511 TMEM250H0YL14 139 aa7.67□□□□□ -1.18
COL6A6-201ENST00000358511 NTN1O95631 604 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms