RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 MARCH11A6NNE9 402 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 CORTO00230 105 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 LYZL2Q7Z4W2 148 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 OR10V1Q8NGI7 309 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 OR51H1Q8NH63 302 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 OR5P3Q8WZ94 311 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 LTBP1Q14766 1721 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 COL16A1Q07092 1604 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-204ENST00000358025 H3BML4 177 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 CLDN17P56750 224 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 OR1L6Q8NGR2 347 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 DPF1Q92782 380 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 SLC25A10Q9UBX3 287 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-204ENST00000358025 C5orf67F2Z3F1 127 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 OPRK1P41145 380 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 ICAM4Q14773 271 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 TMEM97Q5BJF2 176 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 MYPOPQ86VE0 399 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-204ENST00000358025 GATAD1Q8WUU5 269 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 TIMP4Q99727 224 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 OR2J1Q9GZK6 312 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 FGF21Q9NSA1 209 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 C22orf46C9J442 243 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 NPIPB11E5RHQ5 1161 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 TESK1Q15569 626 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 CD226Q15762 336 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 QTRT1Q9BXR0 403 aaKnown RBP3.58□□□□□ -1.84
SYNE2-204ENST00000358025 NEURL1O76050 574 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 LILRA3Q8N6C8 439 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-204ENST00000358025 NGBQ9NPG2 151 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 FAM231BA6NCW3 169 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 SOD3P08294 240 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 HSPB9Q9BQS6 159 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 ERRFI1Q9UJM3 462 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-204ENST00000358025 FUT9Q9Y231 359 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 SSUH2Q9Y2M2 353 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 PTGER4P35408 488 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 REG1BP48304 166 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 PYY3Q5JQD4 70 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 GPR35Q9HC97 309 aa3.58□□□□□ -1.84
SYNE2-204ENST00000358025 TRAV30A0A087WSZ9 112 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 RPS15P62841 145 aaKnown RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 CA5BP1Q8WTZ4 195 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 FAM122AQ96E09 287 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 MRPL13Q9BYD1 178 aaKnown RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 GJA4P35212 333 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 LINC00470Q9BZP3 86 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 KLHDC2Q9Y2U9 406 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 TRAV9-2A0A087WT02 112 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 HLA-DRB1P01911 266 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 TBC1D28Q2M2D7 210 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 FNDC7Q5VTL7 733 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 OR4C12Q96R67 309 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 B4DGG1 531 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 SOCS1O15524 211 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 C2orf27AQ580R0 203 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 TMEM123Q8N131 208 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 HEYLQ9NQ87 328 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 RPRMQ9NS64 109 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 OOEPA6NGQ2 149 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 SP6Q3SY56 376 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 MORN2Q502X0 79 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 SPPL3Q8TCT6 385 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 CLN8Q9UBY8 286 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 LRRC30A6NM36 301 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 IGKV3-11P04433 115 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 PTGDSP41222 190 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 TBC1D26Q86UD7 250 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 GABRG3Q99928 467 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 PRDM13Q9H4Q3 707 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 WASHC3Q9Y3C0 194 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 SERTM2A0A1B0GWG4 89 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 C2orf72A6NCS6 295 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 THY1P04216 161 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 RRADP55042 308 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 HMGN2P46Q86SG4 172 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 NIT1Q86X76 327 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 BCL2L2Q92843 193 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 CD38P28907 300 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 BMI1P35226 326 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 UBE2G1P62253 170 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 SQSTM1Q13501 440 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 C16orf82Q7Z2V1 217 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 OR4X1Q8NH49 305 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 NDFIP1Q9BT67 221 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 OPN3Q9H1Y3 402 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 CNOT1A5YKK6 2376 aaKnown RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 TRBV6-6A0A0A6YYG2 114 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 NKX2-6A6NCS4 301 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 TRGC1P0CF51 173 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 SMIM17P0DL12 118 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 RBM11P57052 281 aaKnown RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 SLC35E4Q6ICL7 350 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 SLC25A34Q6PIV7 304 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF596Q8TC21 504 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 RGP1Q92546 391 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 PLSCR4Q9NRQ2 329 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 BCL3P20749 454 aa3.57□□□□□ -1.84
SYNE2-204ENST00000358025 BRCA1P38398 1863 aaKnown RBP3.57□□□□□ -1.84
SYNE2-204ENST00000358025 ADRA2AP08913 450 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms