RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 HOXB5P09067 269 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 MEF2CQ06413 473 aaPredicted RBP16.98■□□□□ 0.31
TRIM4-202ENST00000354241 Q5BKY6 102 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 CORO2AQ92828 525 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 RAB1CQ92928 201 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 TIMD4Q96H15 378 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 OR2D2Q9H210 308 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 LINC00312Q9Y6C7 94 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 NDUFS7O75251 213 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 IGLV2-14P01704 120 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 GSG1LQ6UXU4 331 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 AKR1E2Q96JD6 320 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 HYLS1Q96M11 299 aa16.98■□□□□ 0.31
TRIM4-202ENST00000354241 UBE2J1Q9Y385 318 aaPredicted RBP16.98■□□□□ 0.31
TRIM4-202ENST00000354241 G3V3Q6 166 aa16.97■□□□□ 0.31
TRIM4-202ENST00000354241 LOXL3P58215 753 aa16.97■□□□□ 0.31
TRIM4-202ENST00000354241 ZNF273Q14593 569 aa16.97■□□□□ 0.31
TRIM4-202ENST00000354241 MORN2Q502X0 79 aa16.97■□□□□ 0.31
TRIM4-202ENST00000354241 LIAT1Q6ZQX7 453 aa16.97■□□□□ 0.31
TRIM4-202ENST00000354241 ZNF645Q8N7E2 425 aa16.97■□□□□ 0.31
TRIM4-202ENST00000354241 GLYATL2Q8WU03 294 aa16.97■□□□□ 0.31
TRIM4-202ENST00000354241 ASB13Q8WXK3 278 aa16.97■□□□□ 0.31
TRIM4-202ENST00000354241 CHODLQ9H9P2 273 aa16.97■□□□□ 0.31
TRIM4-202ENST00000354241 USP9XQ93008 2570 aaPredicted RBP16.97■□□□□ 0.31
TRIM4-202ENST00000354241 A1L4Q6 167 aa16.96■□□□□ 0.31
TRIM4-202ENST00000354241 DRAM1Q8N682 238 aa16.96■□□□□ 0.31
TRIM4-202ENST00000354241 OR11H4Q8NGC9 324 aa16.96■□□□□ 0.31
TRIM4-202ENST00000354241 IDI2-AS1Q9NZ38 188 aa16.96■□□□□ 0.31
TRIM4-202ENST00000354241 PSG11Q9UQ72 335 aa16.96■□□□□ 0.31
TRIM4-202ENST00000354241 ST8SIA5O15466 376 aa16.96■□□□□ 0.3
TRIM4-202ENST00000354241 YPEL1O60688 119 aa16.96■□□□□ 0.3
TRIM4-202ENST00000354241 F12P00748 615 aaPredicted RBP16.96■□□□□ 0.3
TRIM4-202ENST00000354241 IGHV3-7P01780 117 aa16.96■□□□□ 0.3
TRIM4-202ENST00000354241 TMEM200BQ69YZ2 307 aa16.96■□□□□ 0.3
TRIM4-202ENST00000354241 LGI3Q8N145 548 aa16.96■□□□□ 0.3
TRIM4-202ENST00000354241 OR51H1Q8NH63 302 aa16.96■□□□□ 0.3
TRIM4-202ENST00000354241 EDARADDQ8WWZ3 215 aa16.96■□□□□ 0.3
TRIM4-202ENST00000354241 MSI2Q96DH6 328 aaKnown RBP16.96■□□□□ 0.3
TRIM4-202ENST00000354241 YPEL2Q96QA6 119 aa16.96■□□□□ 0.3
TRIM4-202ENST00000354241 PLEKHF2Q9H8W4 249 aa16.96■□□□□ 0.3
TRIM4-202ENST00000354241 TAS2R3Q9NYW6 316 aa16.96■□□□□ 0.3
TRIM4-202ENST00000354241 LPAR3Q9UBY5 353 aa16.96■□□□□ 0.3
TRIM4-202ENST00000354241 MPTX1A8MV57 137 aa16.95■□□□□ 0.3
TRIM4-202ENST00000354241 RGS11O94810 467 aa16.95■□□□□ 0.3
TRIM4-202ENST00000354241 CLDN1O95832 211 aa16.95■□□□□ 0.3
TRIM4-202ENST00000354241 NFYBP25208 207 aa16.95■□□□□ 0.3
TRIM4-202ENST00000354241 PRAMEF5Q5TYX0 476 aa16.95■□□□□ 0.3
TRIM4-202ENST00000354241 GRPEL2Q8TAA5 225 aa16.95■□□□□ 0.3
TRIM4-202ENST00000354241 TMEM222Q9H0R3 208 aa16.95■□□□□ 0.3
TRIM4-202ENST00000354241 GAL3ST2Q9H3Q3 398 aa16.95■□□□□ 0.3
TRIM4-202ENST00000354241 GFOD1Q9NXC2 390 aa16.95■□□□□ 0.3
TRIM4-202ENST00000354241 FLNCQ14315 2725 aa16.95■□□□□ 0.3
TRIM4-202ENST00000354241 MYO18BQ8IUG5 2567 aa16.95■□□□□ 0.3
TRIM4-202ENST00000354241 CCL3L1P16619 93 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 F2RP25116 425 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 EFNA4P52798 201 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 SRSF4Q08170 494 aaKnown RBP16.94■□□□□ 0.3
TRIM4-202ENST00000354241 LEAP2Q969E1 77 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 ABHD14BQ96IU4 210 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 ZNF714Q96N38 554 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 USF3Q68DE3 2245 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 H0Y980 276 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 IFNA21P01568 189 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 COX6B1P14854 86 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 ZNF16P17020 682 aaPredicted RBP16.94■□□□□ 0.3
TRIM4-202ENST00000354241 OR8B3Q8NGG8 313 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 LHFPL5Q8TAF8 219 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 OR8B2Q96RD0 313 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 MIOXQ9UGB7 285 aa16.94■□□□□ 0.3
TRIM4-202ENST00000354241 KMT2BQ9UMN6 2715 aaPredicted RBP16.93■□□□□ 0.3
TRIM4-202ENST00000354241 DOCK11Q5JSL3 2073 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 MMP23AO75900 390 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 TMEM33P57088 247 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 SRPXP78539 464 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 TMEM155Q4W5P6 130 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 TMEM268Q5VZI3 342 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 GGNBP1Q5YKI7 109 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 LYZL2Q7Z4W2 148 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 LRTM2Q8N967 370 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 ZBTB34Q8NCN2 500 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 C5orf30Q96GV9 206 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 C18orf12Q96KH6 178 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 OR10C1Q96KK4 312 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 LINC00574Q9H8X3 128 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 COMMD9Q9P000 198 aa16.93■□□□□ 0.3
TRIM4-202ENST00000354241 OVOL3O00110 214 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 LRRC37A5PQ49AS3 106 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 UTF1Q5T230 341 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 SP5Q6BEB4 398 aaPredicted RBP16.92■□□□□ 0.3
TRIM4-202ENST00000354241 ZNF841Q6ZN19 808 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 ZNF695Q8IW36 515 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 NEIL1Q96FI4 390 aaPredicted RBP16.92■□□□□ 0.3
TRIM4-202ENST00000354241 CCL19Q99731 98 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 AGMATQ9BSE5 352 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 NARFLQ9H6Q4 476 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 BOLA1Q9Y3E2 137 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 SPTAN1Q13813 2472 aaKnown RBP16.92■□□□□ 0.3
TRIM4-202ENST00000354241 UCP1P25874 307 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 GPR6P46095 362 aaPredicted RBP16.92■□□□□ 0.3
TRIM4-202ENST00000354241 GPR12P47775 334 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms