RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 TRAV1-2A0A0B4J238 106 aa8.71□□□□□ -1.01
COL11A1-201ENST00000353414 TSPAN2O60636 221 aa8.71□□□□□ -1.01
COL11A1-201ENST00000353414 OR6X1Q8NH79 312 aa8.71□□□□□ -1.01
COL11A1-201ENST00000353414 ZNF273Q14593 569 aa8.71□□□□□ -1.01
COL11A1-201ENST00000353414 MESTQ5EB52 335 aa8.71□□□□□ -1.01
COL11A1-201ENST00000353414 SGMS2Q8NHU3 365 aa8.71□□□□□ -1.01
COL11A1-201ENST00000353414 ANXA10Q9UJ72 324 aa8.71□□□□□ -1.01
COL11A1-201ENST00000353414 PI4KAP42356 2102 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 PGA3P0DJD8 388 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 ZP3P21754 424 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 TMEM33P57088 247 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 DEFB121Q5J5C9 76 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 RHBDD2Q6NTF9 364 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 LYZL2Q7Z4W2 148 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 SEC11CQ9BY50 192 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 FRRS1LQ9P0K9 344 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 PHLDA3Q9Y5J5 127 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 USP54Q70EL1 1684 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 ABCA3Q99758 1704 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 IFITM10A6NMD0 228 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 ZNF815PA8K554 130 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 TMEM229AB2RXF0 380 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 MVDP53602 400 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 DLX6P56179 175 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 PCOLCEQ15113 449 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 KHDC3LQ587J8 217 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 JMJD6Q6NYC1 403 aaPredicted RBP8.71□□□□□ -1.02
COL11A1-201ENST00000353414 NUBPLQ8TB37 319 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 PAXXQ9BUH6 204 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 PGPEP1Q9NXJ5 209 aa8.71□□□□□ -1.02
COL11A1-201ENST00000353414 TRAV8-7A0A075B6U6 113 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 SYNGR1O43759 233 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 SYNGR2O43760 224 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 TGFAP01135 160 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 MAS1LP35410 378 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 MEOX2P50222 304 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 TMEM78Q5T7P6 136 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 RIMKLAQ8IXN7 391 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 RFLNBQ8N5W9 214 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 ZNF707Q96C28 371 aaPredicted RBP8.7□□□□□ -1.02
COL11A1-201ENST00000353414 YIPF6Q96EC8 236 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 RNF122Q9H9V4 155 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 BCL2L10Q9HD36 194 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 HSPB8Q9UJY1 196 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 TCRBV5S1A1TA0A578 114 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 SNURFLB1AK76 121 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 B4E171 279 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 HINT1P49773 126 aaPredicted RBP8.7□□□□□ -1.02
COL11A1-201ENST00000353414 RBM11P57052 281 aaKnown RBP8.7□□□□□ -1.02
COL11A1-201ENST00000353414 GAB4Q2WGN9 574 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 CLEC18BQ6UXF7 455 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 PRSS27Q9BQR3 290 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 CEACAM18A8MTB9 384 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 UCNP55089 124 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 ERVFRD-1P60508 538 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 SYT8Q8NBV8 401 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 OR10G8Q8NGN5 311 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 DEFB104AQ8WTQ1 72 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 RCC2Q9P258 522 aaKnown RBP8.7□□□□□ -1.02
COL11A1-201ENST00000353414 TMEM189A5PLL7 270 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 CORTO00230 105 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 UPK3AO75631 287 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 MMP9P14780 707 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 RHOVQ96L33 236 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 DUSP21Q9H596 190 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 FGF20Q9NP95 211 aaPredicted RBP8.7□□□□□ -1.02
COL11A1-201ENST00000353414 PIPOXQ9P0Z9 390 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 WIPI2Q9Y4P8 454 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 TP53BP1Q12888 1972 aaPredicted RBP8.7□□□□□ -1.02
COL11A1-201ENST00000353414 SIGLEC5O15389 551 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 PLP1P60201 277 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 ZAR1Q86SH2 424 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 OR8D4Q8NGM9 314 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 GLMPQ8WWB7 406 aa8.7□□□□□ -1.02
COL11A1-201ENST00000353414 RBFOX3A6NFN3 312 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 IGLV3-25P01717 112 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 DLK1P80370 383 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 RELBQ01201 579 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 TEX30Q5JUR7 227 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 NAT8Q9UHE5 227 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 XIRP1Q702N8 1843 aaKnown RBP8.69□□□□□ -1.02
COL11A1-201ENST00000353414 A6NDN8 102 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 LIPT2A6NK58 231 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 K7N7A8 449 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 NKX2-2O95096 273 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 WDR25Q64LD2 544 aaPredicted RBP8.69□□□□□ -1.02
COL11A1-201ENST00000353414 SF3B6Q9Y3B4 125 aaKnown RBP8.69□□□□□ -1.02
COL11A1-201ENST00000353414 TRPM7Q96QT4 1865 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 TCRBV16S1A1N1A0A5B0 115 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 UNQ9370/PRO34162Q6UXP9 181 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 B4DEV8 164 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 NPFFO15130 113 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 IGF2P01344 180 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 MBPP02686 304 aaPredicted RBP8.69□□□□□ -1.02
COL11A1-201ENST00000353414 CALHM1Q8IU99 346 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 VSTM2AQ8TAG5 236 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 OR2A4O95047 310 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 LINC01465Q8N7H1 131 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 OR1L8Q8NGR8 309 aa8.69□□□□□ -1.02
COL11A1-201ENST00000353414 OR2A7Q96R45 310 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms