RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 KCNAB3O43448 404 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 ADAM20O43506 726 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 P2RY1P47900 373 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 KLF14Q8TD94 323 aaPredicted RBP10.46□□□□□ -0.73
SMAD9-201ENST00000350148 ABHD14BQ96IU4 210 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 SCN2AQ99250 2005 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 FGF2P09038 288 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 SLC25A4P12235 298 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 CXCL2P19875 107 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 OR10J1P30954 320 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 PRDX2P32119 198 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 ASCL1P50553 236 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 ERVFRD-1P60508 538 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 RPUSD3Q6P087 351 aaKnown RBP10.46□□□□□ -0.73
SMAD9-201ENST00000350148 ZIC4Q8N9L1 334 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 VSTM2AQ8TAG5 236 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 MRGPRDQ8TDS7 321 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 CCL17Q92583 94 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 IL22RA2Q969J5 263 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 GHITMQ9H3K2 345 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 ZDBF2Q9HCK1 2354 aa10.46□□□□□ -0.73
SMAD9-201ENST00000350148 UCP3P55916 312 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 SPANXN5Q5MJ07 72 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 TBC1D26Q86UD7 250 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 TMEM37Q8WXS4 190 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 TMEM56Q96MV1 263 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 OR2D2Q9H210 308 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 CLCF1Q9UBD9 225 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 PSG11Q9UQ72 335 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 LMX1BO60663 402 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 IL18BPO95998 194 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 CT45A6P0DMU7 189 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 CT45A5P0DMU8 189 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 CT45A7P0DMV0 189 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 CT45A1Q5HYN5 189 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 PIP4P1Q86T03 277 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 RBMXL3Q8N7X1 1067 aaKnown RBP10.46□□□□□ -0.74
SMAD9-201ENST00000350148 CT45A3Q8NHU0 189 aa10.46□□□□□ -0.74
SMAD9-201ENST00000350148 CLEC18AA5D8T8 446 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 ZNF154Q13106 437 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 FAM90A1Q86YD7 464 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 CLEC18CQ8NCF0 446 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 MMP26Q9NRE1 261 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 CNTRLQ7Z7A1 2325 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 PPIAL4EA0A075B759 164 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 SHISA3A0PJX4 238 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 PPIAL4DF5H284 164 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 MFNGO00587 321 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 PPIAL4FP0DN26 164 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 NBL1P41271 181 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 MBD3L1Q8WWY6 194 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 PIPOXQ9P0Z9 390 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 GPR132Q9UNW8 380 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 PPIAL4AQ9Y536 164 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 PTPRZ1P23471 2315 aaPredicted RBP10.45□□□□□ -0.74
SMAD9-201ENST00000350148 MDC1Q14676 2089 aaKnown RBP10.45□□□□□ -0.74
SMAD9-201ENST00000350148 A0A1B0GU03 582 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 BMPR1BO00238 502 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 IGHG3P01860 377 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 SCGB1C2P0DMR2 95 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 B3GALT5-AS1P59052 145 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 NAAAQ02083 359 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 HIST3H3Q16695 136 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 OR8G2PQ6IF36 304 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 SCNM1Q9BWG6 230 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 OPN4Q9UHM6 478 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 PINLYPA6NC86 204 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 MMP9P14780 707 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 SOSTQ9BQB4 213 aa10.45□□□□□ -0.74
SMAD9-201ENST00000350148 ACTR3CQ9C0K3 210 aaPredicted RBP10.45□□□□□ -0.74
SMAD9-201ENST00000350148 SMPD2O60906 423 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 HES1Q14469 280 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 TMEM182Q6ZP80 229 aaPredicted RBP10.44□□□□□ -0.74
SMAD9-201ENST00000350148 ZCCHC14Q8WYQ9 949 aaKnown RBP10.44□□□□□ -0.74
SMAD9-201ENST00000350148 PPIHO43447 177 aaKnown RBP10.44□□□□□ -0.74
SMAD9-201ENST00000350148 CNIH1O95406 144 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 COX5AP20674 150 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 ZNF345Q14585 488 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 VSIG4Q9Y279 399 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 PMCHP20382 165 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 TAS2R45P59539 299 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 ATRAIDQ6UW56 229 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 RXFP4Q8TDU9 374 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 ABHD17AQ96GS6 310 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 TIMP3P35625 211 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 CLEC12BQ2HXU8 276 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 LYRM7Q5U5X0 104 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 IGF2-ASQ6U949 168 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 MOB3AQ96BX8 217 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 FAM210BQ96KR6 192 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 MSL2Q9HCI7 577 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 IQCF6A8MYZ5 107 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 LINC00587B1AMM8 73 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 EIF3GO75821 320 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMAD9-201ENST00000350148 GLI4P10075 376 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 CRYGSP22914 178 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 ACKR3P25106 362 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 PRSS12P56730 875 aa10.44□□□□□ -0.74
SMAD9-201ENST00000350148 MRPS11P82912 194 aaKnown RBP10.44□□□□□ -0.74
SMAD9-201ENST00000350148 ZNF816Q0VGE8 651 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms