RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 EBI3Q14213 229 aa17.65■□□□□ 0.42
SNX3-202ENST00000349379 Q6ZS46 218 aa17.65■□□□□ 0.42
SNX3-202ENST00000349379 ODF3L1Q8IXM7 274 aa17.65■□□□□ 0.42
SNX3-202ENST00000349379 OR13F1Q8NGS4 319 aa17.65■□□□□ 0.42
SNX3-202ENST00000349379 CAPSLQ8WWF8 208 aa17.65■□□□□ 0.42
SNX3-202ENST00000349379 ATG5Q9H1Y0 275 aa17.65■□□□□ 0.42
SNX3-202ENST00000349379 TXNL1O43396 289 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 AMY1AP04745 511 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 AMY2AP04746 511 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 CD3GP09693 182 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 FAM106CPP0CH98 169 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 REG1BP48304 166 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 IZUMO1Q8IYV9 350 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 SGMS2Q8NHU3 365 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 IL1F10Q8WWZ1 152 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 AKR1E2Q96JD6 320 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 PRSS22Q9GZN4 317 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 SERTAD4Q9NUC0 356 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 ETV7Q9Y603 341 aa17.64■□□□□ 0.41
SNX3-202ENST00000349379 ITGB1BP1O14713 200 aa17.63■□□□□ 0.41
SNX3-202ENST00000349379 LANCL1O43813 399 aa17.63■□□□□ 0.41
SNX3-202ENST00000349379 FCGR3AP08637 254 aa17.63■□□□□ 0.41
SNX3-202ENST00000349379 SCTP09683 121 aa17.63■□□□□ 0.41
SNX3-202ENST00000349379 ARL6IP1Q15041 203 aa17.63■□□□□ 0.41
SNX3-202ENST00000349379 OR5H6Q8NGV6 325 aa17.63■□□□□ 0.41
SNX3-202ENST00000349379 FUNDC2Q9BWH2 189 aa17.63■□□□□ 0.41
SNX3-202ENST00000349379 IFI27L2Q9H2X8 130 aa17.63■□□□□ 0.41
SNX3-202ENST00000349379 RHBDL2Q9NX52 303 aa17.63■□□□□ 0.41
SNX3-202ENST00000349379 TET2Q6N021 2002 aaPredicted RBP17.63■□□□□ 0.41
SNX3-202ENST00000349379 IGKV1-6A0A0C4DH72 117 aa17.62■□□□□ 0.41
SNX3-202ENST00000349379 SCGNO76038 276 aa17.62■□□□□ 0.41
SNX3-202ENST00000349379 IDNKQ5T6J7 187 aa17.62■□□□□ 0.41
SNX3-202ENST00000349379 TGIF2LXQ8IUE1 241 aa17.62■□□□□ 0.41
SNX3-202ENST00000349379 LYG1Q8N1E2 194 aa17.62■□□□□ 0.41
SNX3-202ENST00000349379 SLC25A38Q96DW6 304 aa17.62■□□□□ 0.41
SNX3-202ENST00000349379 A0A075B6Q4 140 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 TRDCB7Z8K6 153 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 M0QZK8 103 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 IGKV1D-33P01593 117 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 IGKV1-33P01594 117 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 LPLP06858 475 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 CD1BP29016 333 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 RPS19P39019 145 aaKnown RBP17.61■□□□□ 0.41
SNX3-202ENST00000349379 LSM3P62310 102 aaKnown RBP17.61■□□□□ 0.41
SNX3-202ENST00000349379 HERPUD1Q15011 391 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 SRSF7Q16629 238 aaKnown RBP eCLIP17.61■□□□□ 0.41
SNX3-202ENST00000349379 ZNF833PQ6ZTB9 187 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 MOB3BQ86TA1 216 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 CROCCP3Q8IVE0 287 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 Q8N6K4 173 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 OR2AK2Q8NG84 335 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 WIPF2Q8TF74 440 aaPredicted RBP17.61■□□□□ 0.41
SNX3-202ENST00000349379 TOLLIPQ9H0E2 274 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 PARP12Q9H0J9 701 aaKnown RBP17.61■□□□□ 0.41
SNX3-202ENST00000349379 OR1A1Q9P1Q5 309 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 SLC23A1Q9UHI7 598 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 MOB4Q9Y3A3 225 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 TRRAPQ9Y4A5 3859 aa17.61■□□□□ 0.41
SNX3-202ENST00000349379 ZBTB25P24278 435 aa17.6■□□□□ 0.41
SNX3-202ENST00000349379 MRPS15P82914 257 aaKnown RBP17.6■□□□□ 0.41
SNX3-202ENST00000349379 Q6ZS49 121 aa17.6■□□□□ 0.41
SNX3-202ENST00000349379 OR4A4PQ8NGN8 299 aa17.6■□□□□ 0.41
SNX3-202ENST00000349379 AGMATQ9BSE5 352 aa17.6■□□□□ 0.41
SNX3-202ENST00000349379 CABLES2Q9BTV7 478 aa17.6■□□□□ 0.41
SNX3-202ENST00000349379 WNT10AQ9GZT5 417 aa17.6■□□□□ 0.41
SNX3-202ENST00000349379 ELF5Q9UKW6 265 aaPredicted RBP17.6■□□□□ 0.41
SNX3-202ENST00000349379 SPATA2Q9UM82 520 aa17.6■□□□□ 0.41
SNX3-202ENST00000349379 IGHV3-72A0A0B4J1Y9 119 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 DIRAS3O95661 229 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 GSTP1P09211 210 aaKnown RBP17.59■□□□□ 0.41
SNX3-202ENST00000349379 TMEM11P17152 192 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 ARFRP1Q13795 201 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 HES1Q14469 280 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 KIR2DS1Q14954 304 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 ZNF260Q3ZCT1 412 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 CDNFQ49AH0 187 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 PRR31Q5SQ13 230 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 FAM71F2Q6NXP2 309 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 KLHDC1Q8N7A1 406 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 EAF1Q96JC9 268 aaPredicted RBP17.59■□□□□ 0.41
SNX3-202ENST00000349379 ZNF251Q9BRH9 671 aa17.59■□□□□ 0.41
SNX3-202ENST00000349379 MRPS26Q9BYN8 205 aaKnown RBP17.59■□□□□ 0.41
SNX3-202ENST00000349379 SAA2-SAA4A0A096LPE2 208 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 ZNF736B4DX44 427 aaPredicted RBP17.58■□□□□ 0.4
SNX3-202ENST00000349379 ST8SIA5O15466 376 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 FABP7O15540 132 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 FGF16O43320 207 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 SAA2P0DJI9 122 aaPredicted RBP17.58■□□□□ 0.4
SNX3-202ENST00000349379 DTYMKP23919 212 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 NCS1P62166 190 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 LSAMPQ13449 338 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 HACD4Q5VWC8 232 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 C5orf56Q8N8D9 126 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 EDARADDQ8WWZ3 215 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 NABP2Q9BQ15 211 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 C11orf54Q9H0W9 315 aaPredicted RBP17.58■□□□□ 0.4
SNX3-202ENST00000349379 PIPOXQ9P0Z9 390 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 ZNF230Q9UIE0 474 aaPredicted RBP17.58■□□□□ 0.4
SNX3-202ENST00000349379 WNK1Q9H4A3 2382 aa17.58■□□□□ 0.4
SNX3-202ENST00000349379 A0A0A6YYH2 397 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms