RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 KCNS2Q9ULS6 477 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 MMP24Q9Y5R2 645 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 FREM1Q5H8C1 2179 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 ARID1AO14497 2285 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 C5orf52A6NGY3 159 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 ZNF891A8MT65 544 aaPredicted RBP13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 VSTM5A8MXK1 200 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 ICAM4Q14773 271 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 GUSBP1Q15486 140 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 EIF2S3LQ2VIR3 472 aaKnown RBP13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 Q6ZRM9 215 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 C1QL4Q86Z23 238 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 ZFP82Q8N141 532 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 DRAM1Q8N682 238 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 ZNF645Q8N7E2 425 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 CLDND2Q8NHS1 167 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 MBD3L1Q8WWY6 194 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 GALMQ96C23 342 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 C12orf57Q99622 126 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 CXXC4Q9H2H0 198 aa13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 PUS1Q9Y606 427 aaKnown RBP eCLIP13.06□□□□□ -0.32
TNFSF13-202ENST00000349228 A0A1B0GV50 99 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 A0A1W2PPH5 198 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 MED19A0JLT2 244 aaPredicted RBP13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 CXorf65A6NEN9 183 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 OOEPA6NGQ2 149 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 C1QTNF9BB2RNN3 333 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 CELA3BP08861 270 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 RUNX1Q01196 453 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 SLC35E3Q7Z769 313 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 PINX1Q96BK5 328 aaKnown RBP13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 C20orf24Q9BUV8 137 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 SIRT7Q9NRC8 400 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 B4DEV8 164 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 H3BQ15 152 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 UBE2CO00762 179 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 NXPH3O95157 252 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 OR2C1O95371 312 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 IFNA17P01571 189 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 MEOX2P50222 304 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 PMS2P11Q13670 270 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 LRRC75BQ2VPJ9 315 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 ZNF525Q8N782 197 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 KLF14Q8TD94 323 aaPredicted RBP13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 TVP23CQ96ET8 276 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 OR14J1Q9UGF5 321 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 RFNGQ9Y644 331 aa13.05□□□□□ -0.32
TNFSF13-202ENST00000349228 A6NLC8 198 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 PPIHO43447 177 aaKnown RBP13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 WDR1O75083 606 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 GRPP07492 148 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 MZT1Q08AG7 82 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 TMEM267Q0VDI3 215 aaPredicted RBP13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 CATR1Q13166 79 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 HAGHQ16775 308 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 ZNF429Q86V71 674 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 MYPOPQ86VE0 399 aaPredicted RBP13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 FGFRL1Q8N441 504 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 PRR18Q8N4B5 295 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 TCEAL7Q9BRU2 100 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 NIPSNAP3BQ9BS92 247 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 OBP2BQ9NPH6 170 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 METTL1Q9UBP6 276 aaKnown RBP13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 ARHGAP21Q5T5U3 1957 aa13.04□□□□□ -0.32
TNFSF13-202ENST00000349228 LOC102723971A0A1B0GUV8 181 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 IFNL4K9M1U5 179 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 AQP7O14520 342 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 IGKV3-15P01624 115 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 COX5AP20674 150 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 UBE2KP61086 200 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 SNRPEP62304 92 aaKnown RBP13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 TRIP6Q15654 476 aaKnown RBP13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 IGFBP7Q16270 282 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 ATP6V1FQ16864 119 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 IGFL2Q6UWQ7 119 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 FAM24BQ8N5W8 94 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 ISOC2Q96AB3 205 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 YPEL4Q96NS1 127 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 CISD1Q9NZ45 108 aaKnown RBP13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 TIMM9Q9Y5J7 89 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 TRAV39A0A0B4J263 110 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 PCP4L1A6NKN8 68 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 H3BP45 60 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 LYZL6O75951 148 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 GOSR1O95249 250 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 OPN1MWP04001 364 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 OPN1MW2P0DN77 364 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 OPN1MW3P0DN78 364 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 DAOP14920 347 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 KITLGP21583 273 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 IL2RGP31785 369 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 RPS23P62266 143 aaKnown RBP13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 ATP1A1-AS1Q5TC04 95 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 P2RX4Q99571 388 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 BCL2L14Q9BZR8 327 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 LAMP3Q9UQV4 416 aa13.03□□□□□ -0.32
TNFSF13-202ENST00000349228 SPINK2P20155 84 aa13.02□□□□□ -0.33
TNFSF13-202ENST00000349228 TAGLN2P37802 199 aaKnown RBP13.02□□□□□ -0.33
TNFSF13-202ENST00000349228 ERVS71-1P61550 626 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms