RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SLC33A1O00400 549 aaPredicted RBP8.81□□□□□ -1
CHRNA1-202ENST00000348749 TMPRSS2O15393 492 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 DNPH1O43598 174 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 LINC00310P59036 64 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 DLX2Q07687 328 aaPredicted RBP8.81□□□□□ -1
CHRNA1-202ENST00000348749 ARL16Q0P5N6 197 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 RSPO1Q2MKA7 263 aaPredicted RBP8.81□□□□□ -1
CHRNA1-202ENST00000348749 PIGYQ3MUY2 71 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 TMEM42Q69YG0 159 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 HAPLN4Q86UW8 402 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 LRP11Q86VZ4 500 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 GAPTQ8N292 157 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 RPP25LQ8N5L8 163 aaKnown RBP8.81□□□□□ -1
CHRNA1-202ENST00000348749 OR5AU1Q8NGC0 362 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 OR2D3Q8NGH3 330 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 MRGPRDQ8TDS7 321 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 SPACA9Q96E40 222 aaPredicted RBP8.81□□□□□ -1
CHRNA1-202ENST00000348749 NEIL1Q96FI4 390 aaPredicted RBP8.81□□□□□ -1
CHRNA1-202ENST00000348749 SPOCK3Q9BQ16 436 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 NCOR1P1Q9H4R4 102 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 ELOVL5Q9NYP7 299 aa8.81□□□□□ -1
CHRNA1-202ENST00000348749 KNL1Q8NG31 2342 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 MYO7BQ6PIF6 2116 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 CEP290O15078 2479 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 CTXND1A0A1B0GTU2 59 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A10PA6NDY2 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A18PA6NE21 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A16PA6NEW6 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A20PA6NIJ5 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A8PA6NJQ4 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A7PA6NKC0 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A22PA8MWA6 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A12PA8MX19 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A5PA8MXJ8 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A23PA8MXZ1 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 TUSC2O75896 110 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 IGKV1D-33P01593 117 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 IGKV1-33P01594 117 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 PPBPP02775 128 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 OR5G3P0C626 314 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A15PP0C7V4 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A13PP0C7W8 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A14PP0C7W9 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 FAM90A24PP0C7X0 464 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 CRYGSP22914 178 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 CDKN1AP38936 164 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 UBE2V1Q13404 147 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 MMDQ15546 238 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 ATP6V1FQ16864 119 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 BRICD5Q6PL45 260 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 STPG4Q8N801 248 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 OR10G3Q8NGC4 313 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 OR4F5Q8NH21 305 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 VN1R17PQ8TDU5 208 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 THAP3Q8WTV1 239 aaPredicted RBP8.8□□□□□ -1
CHRNA1-202ENST00000348749 TAF15Q92804 592 aaKnown RBP eCLIP8.8□□□□□ -1
CHRNA1-202ENST00000348749 GPR146Q96CH1 333 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 OR4F4Q96R69 305 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 HSPB9Q9BQS6 159 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 UQCR10Q9UDW1 63 aa8.8□□□□□ -1
CHRNA1-202ENST00000348749 IGKV1-12A0A0C4DH73 117 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 A0A0G2JRQ6 117 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 SLC22A20A6NK97 555 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 A8MXE2 369 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 IGKV1D-12P01611 117 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 WNT2P09544 360 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 CD33P20138 364 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 MPLP40238 635 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 LHX2P50458 406 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 RPS18P62269 152 aaKnown RBP8.79□□□□□ -1
CHRNA1-202ENST00000348749 MSMO1Q15800 293 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 FAM69BQ5VUD6 431 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 Q6ZS52 159 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.79□□□□□ -1
CHRNA1-202ENST00000348749 LINC01551Q86U37 167 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 CALHM1Q8IU99 346 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 BORCS8Q96FH0 119 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 RNF2Q99496 336 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 SF3B5Q9BWJ5 86 aaKnown RBP8.79□□□□□ -1
CHRNA1-202ENST00000348749 CHODLQ9H9P2 273 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 PSENENQ9NZ42 101 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 ST3GAL6Q9Y274 331 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 C5orf42Q9H799 3197 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 TRAV9-1A0A075B6T8 112 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 NPIPA2E9PIF3 369 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 NPIPA3F8WFD2 350 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 TNFSF12O43508 249 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 SYNGR2O43760 224 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 NXPH2O95156 264 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 FUT6P51993 359 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 RBM11P57052 281 aaKnown RBP8.79□□□□□ -1
CHRNA1-202ENST00000348749 TESK1Q15569 626 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 KRTAP27-1Q3LI81 207 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 MORN2Q502X0 79 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 SHISA6Q6ZSJ9 500 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 C1orf174Q8IYL3 243 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 OR4C12Q96R67 309 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 ZNF552Q9H707 407 aaPredicted RBP8.79□□□□□ -1
CHRNA1-202ENST00000348749 PLEK2Q9NYT0 353 aa8.79□□□□□ -1
CHRNA1-202ENST00000348749 LAMTOR2Q9Y2Q5 125 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms