RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 SLC9A3R2Q15599 337 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 ABCA11PQ4W5N1 156 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 TMEM155Q4W5P6 130 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 TMEM200BQ69YZ2 307 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 LIN54Q6MZP7 749 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 LRTM2Q8N967 370 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 CCDC71LQ8N9Z2 235 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 OR52M1Q8NGK5 317 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 RAB1CQ92928 201 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 DMRTB1Q96MA1 342 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 RAB9BQ9NP90 201 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 C19orf12Q9NSK7 152 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 JPT1Q9UK76 154 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 UBE2J1Q9Y385 318 aaPredicted RBP9.06□□□□□ -0.96
ECM1-201ENST00000346569 LRBAP50851 2863 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 ITPR2Q14571 2701 aa9.06□□□□□ -0.96
ECM1-201ENST00000346569 IGHV3-43A0A0B4J1X8 118 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 G3V3Q6 166 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 HSD17B6O14756 317 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 GPR37O15354 613 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 MMP23AO75900 390 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 IGHV3-43DP0DP04 118 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 RAP2BP61225 183 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 RPL31P62899 125 aaKnown RBP9.05□□□□□ -0.96
ECM1-201ENST00000346569 MSMO1Q15800 293 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 DCAF12L2Q5VW00 463 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 TBC1D26Q86UD7 250 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 NOXA1Q86UR1 476 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 ZNF295-AS1Q8N0V1 137 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 ZBTB34Q8NCN2 500 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 OR10A7Q8NGE5 316 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 OR5M8Q8NGP6 311 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 COQ8AQ8NI60 647 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 FAM216AQ8WUB2 273 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 MSI2Q96DH6 328 aaKnown RBP9.05□□□□□ -0.96
ECM1-201ENST00000346569 SUCNR1Q9BXA5 334 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 GFOD1Q9NXC2 390 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 IDI2-AS1Q9NZ38 188 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 MIOXQ9UGB7 285 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 C3orf85A0A1B0GTC6 90 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 GOSR2O14653 212 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 PPIHO43447 177 aaKnown RBP9.05□□□□□ -0.96
ECM1-201ENST00000346569 PROP1O75360 226 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 OR5AC1P0C628 307 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 OMGP23515 440 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 EIF2B2P49770 351 aaKnown RBP9.05□□□□□ -0.96
ECM1-201ENST00000346569 ZNF134P52741 427 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 DLX6P56179 175 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 EIF4EBP1Q13541 118 aaPredicted RBP9.05□□□□□ -0.96
ECM1-201ENST00000346569 ZNF273Q14593 569 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 TMEM30BQ3MIR4 351 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 SP6Q3SY56 376 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 Q5BKY6 102 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 UTF1Q5T230 341 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 AVPI1Q5T686 147 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 C11orf88Q6PI97 169 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 LIAT1Q6ZQX7 453 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 CMTM1Q8IZ96 169 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 C11orf42Q8N5U0 333 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 DRAM1Q8N682 238 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 ASB13Q8WXK3 278 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 NINJ1Q92982 152 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 TIMD4Q96H15 378 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 TMEM56Q96MV1 263 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 TP53RKQ96S44 253 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 RANBP3Q9H6Z4 567 aaPredicted RBP9.05□□□□□ -0.96
ECM1-201ENST00000346569 PATZ1Q9HBE1 687 aaKnown RBP9.05□□□□□ -0.96
ECM1-201ENST00000346569 RAB18Q9NP72 206 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 PRR13Q9NZ81 148 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 LPAR3Q9UBY5 353 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 RPUSD1Q9UJJ7 312 aaKnown RBP9.05□□□□□ -0.96
ECM1-201ENST00000346569 RNF150Q9ULK6 438 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 GAB2Q9UQC2 676 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 TMEM56-RWDD3S4R434 201 aa9.05□□□□□ -0.96
ECM1-201ENST00000346569 CSMD2Q7Z408 3487 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 F5H0A9 414 aaPredicted RBP9.04□□□□□ -0.96
ECM1-201ENST00000346569 SMLR1H3BR10 107 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 ADAP1O75689 374 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 CDS2O95674 445 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 F2RP25116 425 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 UCP1P25874 307 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 IL15RAQ13261 267 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 ZFP69Q49AA0 526 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 WDR25Q64LD2 544 aaPredicted RBP9.04□□□□□ -0.96
ECM1-201ENST00000346569 HEPN1Q6WQI6 88 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 ZNF645Q8N7E2 425 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 ZNF439Q8NDP4 499 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 OR11H4Q8NGC9 324 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 C8orf46Q8TAG6 207 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 EDARADDQ8WWZ3 215 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 NEIL1Q96FI4 390 aaPredicted RBP9.04□□□□□ -0.96
ECM1-201ENST00000346569 C5orf30Q96GV9 206 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 GPHA2Q96T91 129 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 CHIAQ9BZP6 476 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 TMEM222Q9H0R3 208 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 GNG12Q9UBI6 72 aa9.04□□□□□ -0.96
ECM1-201ENST00000346569 RBM7Q9Y580 266 aaKnown RBP9.04□□□□□ -0.96
ECM1-201ENST00000346569 MALRD1Q5VYJ5 2156 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 TRBV23-1A0A0A0MS06 115 aa9.03□□□□□ -0.96
ECM1-201ENST00000346569 A1L4Q6 167 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms