RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 LIN7CQ9NUP9 197 aaKnown RBP19.56■□□□□ 0.72
NKX2-3-201ENST00000344586 TREM2Q9NZC2 230 aa19.56■□□□□ 0.72
NKX2-3-201ENST00000344586 KCNS2Q9ULS6 477 aa19.56■□□□□ 0.72
NKX2-3-201ENST00000344586 ZNF16P17020 682 aaPredicted RBP19.56■□□□□ 0.72
NKX2-3-201ENST00000344586 ZXDAP98168 799 aa19.56■□□□□ 0.72
NKX2-3-201ENST00000344586 ZNF497Q6ZNH5 498 aa19.56■□□□□ 0.72
NKX2-3-201ENST00000344586 UBALD1Q8TB05 177 aa19.56■□□□□ 0.72
NKX2-3-201ENST00000344586 TTTY12Q9BZ98 90 aa19.56■□□□□ 0.72
NKX2-3-201ENST00000344586 GPR61Q9BZJ8 451 aa19.56■□□□□ 0.72
NKX2-3-201ENST00000344586 VAX2Q9UIW0 290 aa19.56■□□□□ 0.72
NKX2-3-201ENST00000344586 SIRPB1O00241 398 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 PHOX2AO14813 284 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 APLNRP35414 380 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 C3AR1Q16581 482 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 OR4C12Q96R67 309 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 MAP1LC3B2A6NCE7 125 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 PDZD11Q5EBL8 140 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 C9orf152Q5JTZ5 239 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 SPATA46Q5T0L3 261 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 MRGPRGQ86SM5 289 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 WDR86Q86TI4 376 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 MAP1LC3BQ9GZQ8 125 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 PRSS50Q9UI38 385 aa19.55■□□□□ 0.72
NKX2-3-201ENST00000344586 ZNF407Q9C0G0 2248 aa19.54■□□□□ 0.72
NKX2-3-201ENST00000344586 CEBPZOSA8MTT3 80 aa19.54■□□□□ 0.72
NKX2-3-201ENST00000344586 GATCO43716 136 aaKnown RBP19.54■□□□□ 0.72
NKX2-3-201ENST00000344586 OR2H2O95918 312 aa19.54■□□□□ 0.72
NKX2-3-201ENST00000344586 MT-CO3P00414 261 aa19.54■□□□□ 0.72
NKX2-3-201ENST00000344586 ELLP55199 621 aaPredicted RBP19.54■□□□□ 0.72
NKX2-3-201ENST00000344586 SPANXN5Q5MJ07 72 aa19.54■□□□□ 0.72
NKX2-3-201ENST00000344586 STRADBQ9C0K7 418 aa19.54■□□□□ 0.72
NKX2-3-201ENST00000344586 RBKSQ9H477 322 aa19.54■□□□□ 0.72
NKX2-3-201ENST00000344586 R4GN57 208 aa19.54■□□□□ 0.72
NKX2-3-201ENST00000344586 DOCK10Q96BY6 2186 aa19.54■□□□□ 0.72
NKX2-3-201ENST00000344586 TMEM105Q8N8V8 129 aa19.53■□□□□ 0.72
NKX2-3-201ENST00000344586 TRAPPC2LQ9UL33 140 aa19.53■□□□□ 0.72
NKX2-3-201ENST00000344586 RBM7Q9Y580 266 aaKnown RBP19.53■□□□□ 0.72
NKX2-3-201ENST00000344586 UBE2L5PA0A1B0GUS4 154 aa19.53■□□□□ 0.72
NKX2-3-201ENST00000344586 WDR1O75083 606 aa19.53■□□□□ 0.72
NKX2-3-201ENST00000344586 WDR25Q64LD2 544 aaPredicted RBP19.53■□□□□ 0.72
NKX2-3-201ENST00000344586 FAM180AQ6UWF9 173 aa19.53■□□□□ 0.72
NKX2-3-201ENST00000344586 MYPOPQ86VE0 399 aaPredicted RBP19.53■□□□□ 0.72
NKX2-3-201ENST00000344586 DRAM1Q8N682 238 aa19.53■□□□□ 0.72
NKX2-3-201ENST00000344586 TMEM251Q8N6I4 163 aa19.53■□□□□ 0.72
NKX2-3-201ENST00000344586 PINX1Q96BK5 328 aaKnown RBP19.53■□□□□ 0.72
NKX2-3-201ENST00000344586 TRBV24-1A0A075B6N3 115 aa19.52■□□□□ 0.72
NKX2-3-201ENST00000344586 TGOLN2O43493 480 aa19.52■□□□□ 0.72
NKX2-3-201ENST00000344586 PTBP3O95758 552 aaKnown RBP19.52■□□□□ 0.72
NKX2-3-201ENST00000344586 IL18BPO95998 194 aa19.52■□□□□ 0.72
NKX2-3-201ENST00000344586 SLC38A11Q08AI6 406 aa19.52■□□□□ 0.72
NKX2-3-201ENST00000344586 CLN3Q13286 438 aa19.52■□□□□ 0.72
NKX2-3-201ENST00000344586 OR1C1Q15619 314 aa19.52■□□□□ 0.72
NKX2-3-201ENST00000344586 ABHD17BQ5VST6 288 aa19.52■□□□□ 0.72
NKX2-3-201ENST00000344586 TAF15Q92804 592 aaKnown RBP eCLIP19.52■□□□□ 0.72
NKX2-3-201ENST00000344586 PRDM13Q9H4Q3 707 aa19.52■□□□□ 0.72
NKX2-3-201ENST00000344586 GP6Q9HCN6 339 aa19.52■□□□□ 0.72
NKX2-3-201ENST00000344586 PDGFBP01127 241 aaPredicted RBP19.52■□□□□ 0.71
NKX2-3-201ENST00000344586 IFNA1P01562 189 aa19.52■□□□□ 0.71
NKX2-3-201ENST00000344586 IGKV1D-33P01593 117 aa19.52■□□□□ 0.71
NKX2-3-201ENST00000344586 IGKV1-33P01594 117 aa19.52■□□□□ 0.71
NKX2-3-201ENST00000344586 BEND4Q6ZU67 534 aa19.52■□□□□ 0.71
NKX2-3-201ENST00000344586 PFDN5Q99471 154 aa19.52■□□□□ 0.71
NKX2-3-201ENST00000344586 ACP1P24666 158 aa19.51■□□□□ 0.71
NKX2-3-201ENST00000344586 ERVK11-1P61568 191 aa19.51■□□□□ 0.71
NKX2-3-201ENST00000344586 C4orf17Q53FE4 359 aa19.51■□□□□ 0.71
NKX2-3-201ENST00000344586 RTL8AQ9BWD3 113 aa19.51■□□□□ 0.71
NKX2-3-201ENST00000344586 MBNL3Q9NUK0 354 aaKnown RBP19.51■□□□□ 0.71
NKX2-3-201ENST00000344586 OR5H1A6NKK0 313 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 OPN1MWP04001 364 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 OPN1MW2P0DN77 364 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 OPN1MW3P0DN78 364 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 CD81P60033 236 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 PMS2P11Q13670 270 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 TMEM14EPQ6UXP3 125 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 MDP1Q86V88 176 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 UBALD2Q8IYN6 164 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 CTDSP1Q9GZU7 261 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 PLA2G3Q9NZ20 509 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 FAM90A26D6RGX4 464 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 ZNF737O75373 536 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 PLA2G5P39877 138 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 CEACAM6P40199 344 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 FGFRL1Q8N441 504 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 RPP25LQ8N5L8 163 aaKnown RBP19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 SCCPDHQ8NBX0 429 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 AGMATQ9BSE5 352 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 C12orf49Q9H741 205 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 CDH20Q9HBT6 801 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 WIPI2Q9Y4P8 454 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 TIMM9Q9Y5J7 89 aa19.5■□□□□ 0.71
NKX2-3-201ENST00000344586 ESPL1Q14674 2120 aa19.49■□□□□ 0.71
NKX2-3-201ENST00000344586 TMEM265A0A087WTH1 108 aa19.49■□□□□ 0.71
NKX2-3-201ENST00000344586 PGA5P0DJD9 388 aa19.49■□□□□ 0.71
NKX2-3-201ENST00000344586 HIST1H1BP16401 226 aaKnown RBP19.49■□□□□ 0.71
NKX2-3-201ENST00000344586 MCEMP1Q8IX19 187 aa19.49■□□□□ 0.71
NKX2-3-201ENST00000344586 LHX4Q969G2 390 aa19.49■□□□□ 0.71
NKX2-3-201ENST00000344586 SPRY4Q9C004 299 aa19.49■□□□□ 0.71
NKX2-3-201ENST00000344586 SMOC1Q9H4F8 434 aa19.49■□□□□ 0.71
NKX2-3-201ENST00000344586 FABP4P15090 132 aa19.48■□□□□ 0.71
NKX2-3-201ENST00000344586 TNFRSF9Q07011 255 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms