RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 RBM7Q9Y580 266 aaKnown RBP11.26□□□□□ -0.61
CDC42-202ENST00000344548 A0A0G2JRQ6 117 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 VSTM5A8MXK1 200 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 CDS2O95674 445 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 IZUMO4Q1ZYL8 232 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 CR1LQ2VPA4 569 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 LGI3Q8N145 548 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 LEAP2Q969E1 77 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 RBMXL1Q96E39 390 aaKnown RBP11.25□□□□□ -0.61
CDC42-202ENST00000344548 TMEM56Q96MV1 263 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 VRK1Q99986 396 aaPredicted RBP11.25□□□□□ -0.61
CDC42-202ENST00000344548 AGMATQ9BSE5 352 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 OR2D2Q9H210 308 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 MS4A5Q9H3V2 200 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 TMEM56-RWDD3S4R434 201 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 ST8SIA5O15466 376 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 PROP1O75360 226 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 MMP23AO75900 390 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 CLDN14O95500 239 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 IGKV1-39P01597 117 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 IGKV1D-39P04432 117 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 MUC1P15941 1255 aaPredicted RBP11.25□□□□□ -0.61
CDC42-202ENST00000344548 COL8A2P25067 703 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 UCP1P25874 307 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 ZNF134P52741 427 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 LOXL3P58215 753 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 RPL30P62888 115 aaKnown RBP11.25□□□□□ -0.61
CDC42-202ENST00000344548 CMTM1Q8IZ96 169 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 FAM185AQ8N0U4 392 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 ZNF808Q8N4W9 903 aaPredicted RBP11.25□□□□□ -0.61
CDC42-202ENST00000344548 OR1S1Q8NH92 325 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 ZNF665Q9H7R5 613 aa11.25□□□□□ -0.61
CDC42-202ENST00000344548 TANC2Q9HCD6 1990 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 TNFRSF13BO14836 293 aaPredicted RBP11.24□□□□□ -0.61
CDC42-202ENST00000344548 SIGLEC5O15389 551 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 BRWD1-AS2P59051 145 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 S100A10P60903 97 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 AKAP6Q13023 2319 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 EXOSC2Q13868 293 aaKnown RBP11.24□□□□□ -0.61
CDC42-202ENST00000344548 ZNF585BQ52M93 769 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 C6orf183Q5T699 404 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 GALNT11Q8NCW6 608 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 THAP6Q8TBB0 222 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 CNTNAP3BQ96NU0 1288 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 CNTNAP3Q9BZ76 1288 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 EGLN1Q9GZT9 426 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 CTSZQ9UBR2 303 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 USP9XQ93008 2570 aaPredicted RBP11.24□□□□□ -0.61
CDC42-202ENST00000344548 YLPM1P49750 1951 aaKnown RBP11.24□□□□□ -0.61
CDC42-202ENST00000344548 PPIAL4EA0A075B759 164 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 PPIAL4DF5H284 164 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 LGALS8O00214 317 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 MBPP02686 304 aaPredicted RBP11.24□□□□□ -0.61
CDC42-202ENST00000344548 SOD3P08294 240 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 PPIAL4FP0DN26 164 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 CYCSP99999 105 aaKnown RBP11.24□□□□□ -0.61
CDC42-202ENST00000344548 BTNL3Q6UXE8 466 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 C1orf229Q6ZS94 237 aaPredicted RBP11.24□□□□□ -0.61
CDC42-202ENST00000344548 DCUN1D4Q92564 292 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 TOLLIPQ9H0E2 274 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 PPIAL4AQ9Y536 164 aa11.24□□□□□ -0.61
CDC42-202ENST00000344548 LRRC30A6NM36 301 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 H0Y980 276 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 SLC31A2O15432 143 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 SCGB1D2O95969 90 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 IFNA21P01568 189 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 RNF224P0DH78 156 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 ZNF16P17020 682 aaPredicted RBP11.23□□□□□ -0.61
CDC42-202ENST00000344548 GZMHP20718 246 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 HTR2BP41595 481 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 EIF4EBP1Q13541 118 aaPredicted RBP11.23□□□□□ -0.61
CDC42-202ENST00000344548 ZNF695Q8IW36 515 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 PPP1R35Q8TAP8 253 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 C14orf79Q96F83 325 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 LRRC46Q96FV0 321 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 CALYQ9NYX4 217 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 PSG11Q9UQ72 335 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 ASH1LQ9NR48 2969 aaKnown RBP11.23□□□□□ -0.61
CDC42-202ENST00000344548 IGHV1-69-2A0A0G2JMI3 117 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 A0A1W2PPE3 182 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 B8ZZF3 427 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 RAMP3O60896 148 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 LYL1P12980 280 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 HTD2P86397 168 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 MORN2Q502X0 79 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 PRSS54Q6PEW0 395 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 KCNRGQ8N5I3 272 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 C19orf12Q9NSK7 152 aa11.23□□□□□ -0.61
CDC42-202ENST00000344548 TACC2O95359 2948 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 SPINT2O43291 252 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 ADAM20O43506 726 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 NXPH3O95157 252 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 ZNF273Q14593 569 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 NMSQ5H8A3 153 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 OR2B11Q5JQS5 317 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 Q6ZRM9 215 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 ACOT7LQ6ZUV0 252 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 ZNF645Q8N7E2 425 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 OR5D13Q8NGL4 314 aa11.22□□□□□ -0.61
CDC42-202ENST00000344548 SDHAF2Q9NX18 166 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms