RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TP53INP2Q8IXH6 220 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 DEFB106AQ8N104 65 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 OR1L4Q8NGR5 311 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 IGFLR1Q9H665 355 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 FAM157AC9JC47 383 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 PYCARD-AS1I3L0S3 204 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 EIF4EP06730 217 aaKnown RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 WBP2NLQ6ICG8 309 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 MED25Q71SY5 747 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 ERRFI1Q9UJM3 462 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 USF3Q68DE3 2245 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 RALGAPA1Q6GYQ0 2036 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 EFEMP1Q12805 493 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 GAGE2AQ6NT46 116 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 LRTM2Q8N967 370 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF665Q9H7R5 613 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 THAP10Q9P2Z0 257 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 SLC5A6Q9Y289 635 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 LYZL6O75951 148 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM255BQ8WV15 326 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 TIMM9Q9Y5J7 89 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 SRSF1Q07955 248 aaKnown RBP eCLIP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 RUNX3Q13761 415 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 MROH1Q8NDA8 1641 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 FGF8P55075 233 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 CCDC144NLQ6NUI1 221 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 PEX11GQ96HA9 241 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF703Q9H7S9 590 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 FTSJ1Q9UET6 329 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 SIGLEC9Q9Y336 463 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 CBLN1P23435 193 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 TMEFF1Q8IYR6 380 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 PBOV1Q9GZY1 135 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 MALRD1Q5VYJ5 2156 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 SNURFLB1AK76 121 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 FGF17O60258 216 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 CXCL8P10145 99 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 PNLIPP16233 465 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 SLC25A1P53007 311 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 DIO3P55073 304 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 RPS23P62266 143 aaKnown RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 WIPI1Q5MNZ9 446 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 ATP5L2Q7Z4Y8 100 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 ABHD5Q8WTS1 349 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF732B4DXR9 585 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 VN1R1Q9GZP7 353 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 HHEXQ03014 270 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 OR4X1Q8NH49 305 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 GALPQ9UBC7 116 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 TTC28Q96AY4 2481 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 SHISA9B4DS77 424 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 NDUFC1O43677 76 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 PCBP3P57721 371 aaKnown RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 CYB561A3Q8NBI2 242 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 RDH5Q92781 318 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 IL36AQ9UHA7 158 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 GPR52Q9Y2T5 361 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 MYOM1P52179 1685 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 A0A0G2JLM5 398 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 H3BRM9 83 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 CLDN17P56750 224 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 PAQR9Q6ZVX9 377 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 ARPC1AQ92747 370 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 TRAV2A0A0B4J234 112 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM233B4DJY2 109 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 RRHO14718 337 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 GNB1LQ9BYB4 327 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 TAC3Q9UHF0 121 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 COL1A1P02452 1464 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 A0A0J9YY10 115 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 A0A1B0GX78 115 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 DGCR2P98153 550 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 PRR30Q53SZ7 412 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-202ENST00000344113 C10orf128Q5T292 105 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 Q8NFD4 153 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 SLC25A40Q8TBP6 338 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 SLC17A2O00624 439 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 NCR2O95944 276 aa3.3□□□□□ -1.88
SYNE2-202ENST00000344113 IGHV2-26A0A0B4J1V2 119 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 SLC10A6Q3KNW5 377 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 LSM10Q969L4 123 aaKnown RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 G3V4G9 280 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 NDUFS4O43181 175 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 LRRC75A-AS1Q8N1F1 130 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 OR2T6Q8NHC8 308 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 NRG2O14511 850 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF324O75467 553 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 PSMB5P28074 263 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 DMRTC1Q5HYR2 192 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 NEURL3Q96EH8 262 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 CTXND1A0A1B0GTU2 59 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 B4DGG1 531 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 H3BMM0 161 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 LILRA4P59901 499 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 YPEL3P61236 119 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 HBBP68871 147 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 CEACAM8P31997 349 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 SUMO3P55854 103 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-202ENST00000344113 CLDN15P56746 228 aa3.29□□□□□ -1.88
SYNE2-202ENST00000344113 ZFP41Q8N8Y5 198 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms