RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 C7orf77A4D0Y5 90 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 GABRA2P47869 451 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 GUSBP1Q15486 140 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 HMGN3Q15651 99 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 FIP1L1Q6UN15 594 aaKnown RBP12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 FAM180AQ6UWF9 173 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 OR8G5Q8NG78 346 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 SFT2D1Q8WV19 159 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 OR2D2Q9H210 308 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 MBNL3Q9NUK0 354 aaKnown RBP12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 LIN7CQ9NUP9 197 aaKnown RBP12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 KCNIP1Q9NZI2 227 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 ANKRD11Q6UB99 2663 aaPredicted RBP12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 BSNQ9UPA5 3926 aa12.54□□□□□ -0.4
VIPAS39-202ENST00000343765 COLCA2A8K830 154 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 KIAA1324LA8MWY0 1029 aaPredicted RBP12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 IGKV3-15P01624 115 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 HEXAP06865 529 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 MMP9P14780 707 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 LMO1P25800 156 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 RPL35P42766 123 aaKnown RBP12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 Q6ZR03 302 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 ZNF610Q8N9Z0 462 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 MRGPRDQ8TDS7 321 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 METRNQ9UJH8 293 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 PUS1Q9Y606 427 aaKnown RBP eCLIP12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 INTS1Q8N201 2190 aaKnown RBP12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 TMEM30CPA0ZSE6 113 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 C12orf77C9JDV5 145 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 AQP7O14520 342 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 IL2RGP31785 369 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 RAB13P51153 203 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 SPSB3Q6PJ21 355 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 C11orf53Q8IXP5 236 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 LFNGQ8NES3 379 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 SARAFQ96BY9 339 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 GNPNAT1Q96EK6 184 aaPredicted RBP12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 RSG1Q9BU20 258 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 WIPI2Q9Y4P8 454 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 ROS1P08922 2347 aa12.53□□□□□ -0.4
VIPAS39-202ENST00000343765 TMEM210A6NLX4 147 aa12.52□□□□□ -0.4
VIPAS39-202ENST00000343765 SYNGR2O43760 224 aa12.52□□□□□ -0.4
VIPAS39-202ENST00000343765 RAMP3O60896 148 aa12.52□□□□□ -0.4
VIPAS39-202ENST00000343765 SULT1A1P50225 295 aa12.52□□□□□ -0.4
VIPAS39-202ENST00000343765 HNF4GQ14541 408 aa12.52□□□□□ -0.4
VIPAS39-202ENST00000343765 RAB40CQ96S21 281 aa12.52□□□□□ -0.4
VIPAS39-202ENST00000343765 PSENENQ9NZ42 101 aa12.52□□□□□ -0.4
VIPAS39-202ENST00000343765 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.4
VIPAS39-202ENST00000343765 IGHV3-43A0A0B4J1X8 118 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 PTBP3O95758 552 aaKnown RBP12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 IFNA5P01569 189 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 FBP1P09467 338 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 IGHV3-43DP0DP04 118 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 COX5AP20674 150 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 ARL16Q0P5N6 197 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 ZNF816Q0VGE8 651 aaPredicted RBP12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 ACSF3Q4G176 576 aaPredicted RBP12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 SHEQ5VZ18 495 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 BTNL3Q6UXE8 466 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 GALMQ96C23 342 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 MUC6Q6W4X9 2439 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 RBFOX3A6NFN3 312 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 PRR33A8MZF0 331 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 HBZP02008 142 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 ARG1P05089 322 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 LTC4SQ16873 150 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 SPANXN5Q5MJ07 72 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 RFESDQ8TAC1 157 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 TAAR6Q96RI8 345 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 CXXC4Q9H2H0 198 aa12.52□□□□□ -0.41
VIPAS39-202ENST00000343765 A0A1W2PPH5 198 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 KRASP01116 189 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 SSTR5P35346 364 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 SOHLH1Q5JUK2 328 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 WDR82Q6UXN9 313 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 LSM10Q969L4 123 aaKnown RBP12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 COQ2Q96H96 371 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 HES4Q9HCC6 221 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 DEFB108AA8MXU0 73 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 GCH1P30793 250 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 GLIPR1P48060 266 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 TAS2R30P59541 319 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 ACP7Q6ZNF0 438 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 FGFRL1Q8N441 504 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 PLPPR2Q96GM1 343 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 C5orf30Q96GV9 206 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 WSB1Q9Y6I7 421 aa12.51□□□□□ -0.41
VIPAS39-202ENST00000343765 PCNX1Q96RV3 2341 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 A0A1W2PPE2 198 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 EIF3GO75821 320 aaKnown RBP eCLIP12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 DFFBO76075 338 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 SLC25A6P12236 298 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 G6PCP35575 357 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 LINC00205P59089 165 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 RPL30P62888 115 aaKnown RBP12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 COL10A1Q03692 680 aa12.5□□□□□ -0.41
VIPAS39-202ENST00000343765 EDDM3AQ14507 147 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms