RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PRR14Q9BWN1 585 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 MS4A7Q9GZW8 240 aaPredicted RBP15.55■□□□□ 0.08
SMAD4-201ENST00000342988 CYB5R3P00387 301 aaPredicted RBP15.55■□□□□ 0.08
SMAD4-201ENST00000342988 ZNF714Q96N38 554 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 FLRT3Q9NZU0 649 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 TUBD1Q9UJT1 453 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 PSG6Q00889 435 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 GUCA2AQ02747 115 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 ZNF750Q32MQ0 723 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 PYCR3Q53H96 274 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 UNQ9370/PRO34162Q6UXP9 181 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 RBBP6Q7Z6E9 1792 aaKnown RBP15.55■□□□□ 0.08
SMAD4-201ENST00000342988 SMOC1Q9H4F8 434 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 TNRC6AQ8NDV7 1962 aaKnown RBP15.55■□□□□ 0.08
SMAD4-201ENST00000342988 CXorf65A6NEN9 183 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 ERGP11308 486 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 OR5AN1Q8NGI8 311 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 TMEM170BQ5T4T1 132 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 BHLHA15Q7RTS1 189 aaPredicted RBP15.55■□□□□ 0.08
SMAD4-201ENST00000342988 UBE2FQ969M7 185 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 DDA1Q9BW61 102 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 IGKV3OR2-268A0A0C4DH90 116 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 PAGE4O60829 102 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 ISOC2Q96AB3 205 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 TMEM45BQ96B21 275 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 PLEKHB1Q9UF11 243 aaPredicted RBP15.54■□□□□ 0.08
SMAD4-201ENST00000342988 WTIPA6NIX2 430 aaPredicted RBP15.54■□□□□ 0.08
SMAD4-201ENST00000342988 J3QR06 171 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 CX3CL1P78423 397 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 TMEM52BQ4KMG9 183 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 RNF186Q9NXI6 227 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 IGHV3OR16-12A0A075B7B8 117 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 GFRA1P56159 465 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 PRICKLE4Q2TBC4 344 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 SPNS2Q8IVW8 549 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 PKD1L3Q7Z443 1732 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 SFTPCP11686 197 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 A0A1W2PR48 441 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 GFYI3L273 518 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 ATP5LO75964 103 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 SLC25A35Q3KQZ1 300 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 MS4A6AQ9H2W1 248 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 RNF122Q9H9V4 155 aa15.54■□□□□ 0.08
SMAD4-201ENST00000342988 CEACAM18A8MTB9 384 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 LHFPL5Q8TAF8 219 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 NPVFQ9HCQ7 196 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 CYSLTR1Q9Y271 337 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 K7N7A8 449 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 CAPZBP47756 277 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 FAM109BQ6ICB4 259 aaPredicted RBP15.53■□□□□ 0.08
SMAD4-201ENST00000342988 OR10S1Q8NGN2 331 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 BCL2L10Q9HD36 194 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 COL3A1P02461 1466 aaPredicted RBP15.53■□□□□ 0.08
SMAD4-201ENST00000342988 GGTLC3B5MD39 225 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 HMGA2P52926 109 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 PRSS53Q2L4Q9 553 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 FAM53CQ9NYF3 392 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 TNFRSF18Q9Y5U5 241 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 ZNF236Q9UL36 1845 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 FZD5Q13467 585 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 C15orf39Q6ZRI6 1047 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 TUBA4BQ9H853 241 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 KBTBD11-OT1A0A1B0GTJ5 212 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 SRSF4Q08170 494 aaKnown RBP15.53■□□□□ 0.08
SMAD4-201ENST00000342988 FAM106AQ4KMX7 169 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 RFESDQ8TAC1 157 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 DDTP30046 118 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 DPTQ07507 201 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 KLF9Q13886 244 aaPredicted RBP15.53■□□□□ 0.08
SMAD4-201ENST00000342988 AGERQ15109 404 aa15.53■□□□□ 0.08
SMAD4-201ENST00000342988 GPX1P07203 203 aa15.52■□□□□ 0.08
SMAD4-201ENST00000342988 CLEC2AQ6UVW9 174 aa15.52■□□□□ 0.08
SMAD4-201ENST00000342988 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.52■□□□□ 0.08
SMAD4-201ENST00000342988 ETFBKMTQ8IXQ9 262 aa15.52■□□□□ 0.08
SMAD4-201ENST00000342988 C10orf111Q8N326 155 aa15.52■□□□□ 0.08
SMAD4-201ENST00000342988 ELSPBP1Q96BH3 223 aa15.52■□□□□ 0.08
SMAD4-201ENST00000342988 TMIGD3P0DMS9 266 aaPredicted RBP15.52■□□□□ 0.08
SMAD4-201ENST00000342988 FAM159AQ6UWV7 190 aa15.52■□□□□ 0.08
SMAD4-201ENST00000342988 POLR2GP62487 172 aaKnown RBP eCLIP15.52■□□□□ 0.07
SMAD4-201ENST00000342988 TMEM160Q9NX00 188 aa15.52■□□□□ 0.07
SMAD4-201ENST00000342988 C7orf77A4D0Y5 90 aa15.52■□□□□ 0.07
SMAD4-201ENST00000342988 AKIP1Q9NQ31 210 aa15.52■□□□□ 0.07
SMAD4-201ENST00000342988 MARVELD1Q9BSK0 173 aa15.52■□□□□ 0.07
SMAD4-201ENST00000342988 DERL1Q9BUN8 251 aa15.52■□□□□ 0.07
SMAD4-201ENST00000342988 TRAV30A0A087WSZ9 112 aa15.52■□□□□ 0.07
SMAD4-201ENST00000342988 PPP6CO00743 305 aa15.52■□□□□ 0.07
SMAD4-201ENST00000342988 S100A7L2Q5SY68 101 aa15.52■□□□□ 0.07
SMAD4-201ENST00000342988 G6PC2Q9NQR9 355 aa15.52■□□□□ 0.07
SMAD4-201ENST00000342988 NEU3Q9UQ49 428 aa15.52■□□□□ 0.07
SMAD4-201ENST00000342988 GDF9O60383 454 aa15.51■□□□□ 0.07
SMAD4-201ENST00000342988 OR1P1Q8NH06 330 aa15.51■□□□□ 0.07
SMAD4-201ENST00000342988 VGLL1Q99990 258 aa15.51■□□□□ 0.07
SMAD4-201ENST00000342988 CCL27Q9Y4X3 112 aa15.51■□□□□ 0.07
SMAD4-201ENST00000342988 PLXND1Q9Y4D7 1925 aa15.51■□□□□ 0.07
SMAD4-201ENST00000342988 DXOO77932 396 aaKnown RBP15.51■□□□□ 0.07
SMAD4-201ENST00000342988 HOXA5P20719 270 aa15.51■□□□□ 0.07
SMAD4-201ENST00000342988 EMDP50402 254 aa15.51■□□□□ 0.07
SMAD4-201ENST00000342988 ZNF345Q14585 488 aa15.51■□□□□ 0.07
SMAD4-201ENST00000342988 ARFGEF1Q9Y6D6 1849 aa15.51■□□□□ 0.07
SMAD4-201ENST00000342988 PRR14LQ5THK1 2151 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms