RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ADAM20O43506 726 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 HKR1P10072 659 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 MUC1P15941 1255 aaPredicted RBP16.64■□□□□ 0.25
RTN1-202ENST00000342503 GZMHP20718 246 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 APOBEC3AP31941 199 aaPredicted RBP16.64■□□□□ 0.25
RTN1-202ENST00000342503 HTD2P86397 168 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 FAM209AQ5JX71 171 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 CCL13Q99616 98 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 OR2D2Q9H210 308 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 ZNF665Q9H7R5 613 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 SAP30LQ9HAJ7 183 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 ATRXP46100 2492 aa16.64■□□□□ 0.25
RTN1-202ENST00000342503 VDAC1P21796 283 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 LTC4SQ16873 150 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 MST1LQ2TV78 715 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 NMSQ5H8A3 153 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 ZNF788Q6ZQV5 615 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 C14orf79Q96F83 325 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 C5orf30Q96GV9 206 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 SPIN2AQ99865 258 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 SPIN2BQ9BPZ2 258 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 DYNLRB1Q9NP97 96 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 KCNJ16Q9NPI9 418 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 CYTL1Q9NRR1 136 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 ZFP57Q9NU63 452 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 RNF115Q9Y4L5 304 aa16.63■□□□□ 0.25
RTN1-202ENST00000342503 TANC2Q9HCD6 1990 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 TMEM8BA6NDV4 472 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 SIAH2O43255 324 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 SERPINE2P07093 398 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 ZNF16P17020 682 aaPredicted RBP16.62■□□□□ 0.25
RTN1-202ENST00000342503 ZBTB34Q8NCN2 500 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 NCOR1P1Q9H4R4 102 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 RCL1Q9Y2P8 373 aaKnown RBP16.62■□□□□ 0.25
RTN1-202ENST00000342503 DSCAML1Q8TD84 2053 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 PIEZO1Q92508 2521 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 DEFB108AA8MXU0 73 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 E5RGE8 158 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 ST8SIA3O43173 380 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 RPL12P30050 165 aaKnown RBP16.62■□□□□ 0.25
RTN1-202ENST00000342503 EFNB3Q15768 340 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 ZNF808Q8N4W9 903 aaPredicted RBP16.62■□□□□ 0.25
RTN1-202ENST00000342503 FAM216BQ8N7L0 139 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 PLEKHF2Q9H8W4 249 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 LIN7CQ9NUP9 197 aaKnown RBP16.62■□□□□ 0.25
RTN1-202ENST00000342503 NSG2Q9Y328 171 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 POMT1Q9Y6A1 747 aa16.62■□□□□ 0.25
RTN1-202ENST00000342503 SPTA1P02549 2419 aa16.61■□□□□ 0.25
RTN1-202ENST00000342503 CLEC18AA5D8T8 446 aa16.61■□□□□ 0.25
RTN1-202ENST00000342503 IGKV1-39P01597 117 aa16.61■□□□□ 0.25
RTN1-202ENST00000342503 IGKV1D-39P04432 117 aa16.61■□□□□ 0.25
RTN1-202ENST00000342503 CLEC18CQ8NCF0 446 aa16.61■□□□□ 0.25
RTN1-202ENST00000342503 CITED4Q96RK1 184 aa16.61■□□□□ 0.25
RTN1-202ENST00000342503 FAM234AQ9H0X4 552 aa16.61■□□□□ 0.25
RTN1-202ENST00000342503 ZC4H2Q9NQZ6 224 aa16.61■□□□□ 0.25
RTN1-202ENST00000342503 CISD1Q9NZ45 108 aaKnown RBP16.61■□□□□ 0.25
RTN1-202ENST00000342503 OR6C3Q9NZP0 311 aa16.61■□□□□ 0.25
RTN1-202ENST00000342503 AUP1Q9Y679 476 aa16.61■□□□□ 0.25
RTN1-202ENST00000342503 RNF212BA8MTL3 300 aa16.6■□□□□ 0.25
RTN1-202ENST00000342503 LEUTXA8MZ59 168 aa16.6■□□□□ 0.25
RTN1-202ENST00000342503 B9A039 149 aa16.6■□□□□ 0.25
RTN1-202ENST00000342503 LGALS8O00214 317 aa16.6■□□□□ 0.25
RTN1-202ENST00000342503 SIGLEC5O15389 551 aa16.6■□□□□ 0.25
RTN1-202ENST00000342503 EIF4EBP1Q13541 118 aaPredicted RBP16.6■□□□□ 0.25
RTN1-202ENST00000342503 ZNF585BQ52M93 769 aa16.6■□□□□ 0.25
RTN1-202ENST00000342503 THOC7Q6I9Y2 204 aaKnown RBP16.6■□□□□ 0.25
RTN1-202ENST00000342503 DMBX1Q8NFW5 382 aa16.6■□□□□ 0.25
RTN1-202ENST00000342503 STOML3Q8TAV4 291 aa16.6■□□□□ 0.25
RTN1-202ENST00000342503 MS4A5Q9H3V2 200 aa16.6■□□□□ 0.25
RTN1-202ENST00000342503 PLEKHA2Q9HB19 425 aa16.6■□□□□ 0.25
RTN1-202ENST00000342503 CALYQ9NYX4 217 aa16.6■□□□□ 0.25
RTN1-202ENST00000342503 A0A0G2JRQ6 117 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 ANKRD34BA5PLL1 514 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 TMEM178BH3BS89 294 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 ST8SIA5O15466 376 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 NMBP08949 121 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 CGB3P0DN86 165 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 CGB7P0DN87 165 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 MSMO1Q15800 293 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 C1orf87Q8N0U7 546 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 GPR146Q96CH1 333 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 JPT1Q9UK76 154 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 PSG11Q9UQ72 335 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 HCFC1P51610 2035 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 ARID1AO14497 2285 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 TRAV38-1A0A0B4J264 116 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 PIGBOS1A0A0B4J2F0 54 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 NKX6-3A6NJ46 265 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 F2RL2O00254 374 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 CACNA1AO00555 2505 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 NKX2-1P43699 371 aaPredicted RBP16.59■□□□□ 0.25
RTN1-202ENST00000342503 C17orf58Q2M2W7 97 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 MORN2Q502X0 79 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 CCL17Q92583 94 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 PHYHIPLQ96FC7 376 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 ABHD14BQ96IU4 210 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 TMEM106BQ9NUM4 274 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 GNG12Q9UBI6 72 aa16.59■□□□□ 0.25
RTN1-202ENST00000342503 PPIAL4EA0A075B759 164 aa16.58■□□□□ 0.24
RTN1-202ENST00000342503 PPIAL4DF5H284 164 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms