RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 RAB9BQ9NP90 201 aa10.65□□□□□ -0.7
TUBD1-202ENST00000340993 IFT46Q9NQC8 304 aa10.65□□□□□ -0.7
TUBD1-202ENST00000340993 CCDC59Q9P031 241 aaKnown RBP10.65□□□□□ -0.7
TUBD1-202ENST00000340993 JPT1Q9UK76 154 aa10.65□□□□□ -0.7
TUBD1-202ENST00000340993 HSD17B6O14756 317 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 HNF4GQ14541 408 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 MINOS1Q5TGZ0 78 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 CNIH2Q6PI25 160 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 MOB3BQ86TA1 216 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 LDLRAD3Q86YD5 345 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 DRAM1Q8N682 238 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 MCFD2Q8NI22 146 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 MALSU1Q96EH3 234 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 C19orf24Q9BVV8 132 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 RDH8Q9NYR8 311 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 AMMECR1Q9Y4X0 333 aaPredicted RBP10.65□□□□□ -0.71
TUBD1-202ENST00000340993 MINOS1-NBL1R4GNA1 71 aa10.65□□□□□ -0.71
TUBD1-202ENST00000340993 TIMM23O14925 209 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 APOA1P02647 267 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 NFYAP23511 347 aaPredicted RBP10.64□□□□□ -0.71
TUBD1-202ENST00000340993 ZBTB25P24278 435 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 ARPC4P59998 168 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 HTD2P86397 168 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 HES1Q14469 280 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 PNLIPRP3Q17RR3 467 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 RPL39P5Q59GN2 51 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 ZNF439Q8NDP4 499 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 OR52M1Q8NGK5 317 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 OR10J5Q8NHC4 309 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 CAPSLQ8WWF8 208 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 BCL7BQ9BQE9 202 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 SLIRPQ9GZT3 109 aaKnown RBP10.64□□□□□ -0.71
TUBD1-202ENST00000340993 DPAGT1Q9H3H5 408 aa10.64□□□□□ -0.71
TUBD1-202ENST00000340993 RBM7Q9Y580 266 aaKnown RBP10.64□□□□□ -0.71
TUBD1-202ENST00000340993 SAA2-SAA4A0A096LPE2 208 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 SH2D7A6NKC9 451 aaPredicted RBP10.63□□□□□ -0.71
TUBD1-202ENST00000340993 ZNF736B4DX44 427 aaPredicted RBP10.63□□□□□ -0.71
TUBD1-202ENST00000340993 GPR137BO60478 399 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 SAA2P0DJI9 122 aaPredicted RBP10.63□□□□□ -0.71
TUBD1-202ENST00000340993 DTYMKP23919 212 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 CEACAM3P40198 252 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 KIR2DS4P43632 304 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 KIR2DS1Q14954 304 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 ARL6IP1Q15041 203 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 C16orf87Q6PH81 154 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 CCBE1Q6UXH8 406 aaPredicted RBP10.63□□□□□ -0.71
TUBD1-202ENST00000340993 SLC25A48Q6ZT89 311 aaKnown RBP10.63□□□□□ -0.71
TUBD1-202ENST00000340993 BEST4Q8NFU0 473 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 OR4A4PQ8NGN8 299 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 PIFOQ8TCI5 191 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 MEGF9Q9H1U4 602 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.63□□□□□ -0.71
TUBD1-202ENST00000340993 VPREB3Q9UKI3 123 aa10.63□□□□□ -0.71
TUBD1-202ENST00000340993 A0A0A6YYH2 397 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 A6NJ64 397 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 LY6LH3BQJ8 138 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 CHST1O43916 411 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 TMEM127O75204 238 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 RGS11O94810 467 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 HLA-DQB1P01920 261 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 RNASE1P07998 156 aaKnown RBP10.62□□□□□ -0.71
TUBD1-202ENST00000340993 HLA-DMAP28067 261 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 PRSS3P35030 304 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 LINC00205P59089 165 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 PITPNAQ00169 270 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 TUSC1Q2TAM9 212 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 STEAP3Q658P3 488 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 GLDNQ6ZMI3 551 aaPredicted RBP10.62□□□□□ -0.71
TUBD1-202ENST00000340993 DRAXINQ8NBI3 349 aaPredicted RBP10.62□□□□□ -0.71
TUBD1-202ENST00000340993 DIRAS2Q96HU8 199 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 OCSTAMPQ9BR26 566 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 C11orf54Q9H0W9 315 aaPredicted RBP10.62□□□□□ -0.71
TUBD1-202ENST00000340993 IFI27L2Q9H2X8 130 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 MGAT4AQ9UM21 535 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 A0A0A6YYJ9 748 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 A0A1W2PPI3 338 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 YPEL1O60688 119 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 PMP2P02689 132 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 CRYBA1P05813 215 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 SNRNP70P08621 437 aaKnown RBP10.62□□□□□ -0.71
TUBD1-202ENST00000340993 OR8U9P0C7N5 309 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 IL3RAP26951 378 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 IL18Q14116 193 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 ZNF554Q86TJ5 538 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 ODF3L1Q8IXM7 274 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 OR8U1Q8NH10 309 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 RTN4IP1Q8WWV3 396 aaPredicted RBP10.62□□□□□ -0.71
TUBD1-202ENST00000340993 TMEM158Q8WZ71 300 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 SNAPC3Q92966 411 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 YPEL2Q96QA6 119 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 MRPL20Q9BYC9 149 aaKnown RBP10.62□□□□□ -0.71
TUBD1-202ENST00000340993 OR2D2Q9H210 308 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 PRDM13Q9H4Q3 707 aa10.62□□□□□ -0.71
TUBD1-202ENST00000340993 IGHV1-3A0A0C4DH29 117 aa10.61□□□□□ -0.71
TUBD1-202ENST00000340993 IGKV1D-33P01593 117 aa10.61□□□□□ -0.71
TUBD1-202ENST00000340993 IGKV1-33P01594 117 aa10.61□□□□□ -0.71
TUBD1-202ENST00000340993 DHRS7BQ6IAN0 325 aaPredicted RBP10.61□□□□□ -0.71
TUBD1-202ENST00000340993 TGIF2LXQ8IUE1 241 aa10.61□□□□□ -0.71
TUBD1-202ENST00000340993 CABLES2Q9BTV7 478 aa10.61□□□□□ -0.71
TUBD1-202ENST00000340993 ANXA10Q9UJ72 324 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms