RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 ASCL5Q7RTU5 278 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 OR2T10Q8NGZ9 312 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 UBALD1Q8TB05 177 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 TMEM147Q9BVK8 224 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 MDFIC2A0A1B0GVS7 189 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 LNP1A1A4G5 178 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 MT-CO3P00414 261 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 FGF5P12034 268 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 COX6A1P12074 109 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 RPP30P78346 268 aaKnown RBP8.08□□□□□ -1.12
TRERF1-201ENST00000340840 PDLIM3Q53GG5 364 aaPredicted RBP8.08□□□□□ -1.12
TRERF1-201ENST00000340840 DCAF12Q5T6F0 453 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 HIST3H2BBQ8N257 126 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 MRPL30Q8TCC3 161 aaKnown RBP8.08□□□□□ -1.12
TRERF1-201ENST00000340840 NEIL1Q96FI4 390 aaPredicted RBP8.08□□□□□ -1.12
TRERF1-201ENST00000340840 SRD5A3Q9H8P0 318 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 MANBALQ9NQG1 85 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 PCDH15Q96QU1 1955 aa8.08□□□□□ -1.12
TRERF1-201ENST00000340840 A0A0U1RQK1 487 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 CTXND1A0A1B0GTU2 59 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 SH2D1BO14796 132 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 KRASP01116 189 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 SLC25A6P12236 298 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 TRA2AQ13595 282 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRERF1-201ENST00000340840 IQCJQ1A5X6 159 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 FFAR4Q5NUL3 377 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 H2BFWTQ7Z2G1 175 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 C16orf82Q7Z2V1 217 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 Q8IYB0 196 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 OR10G9Q8NGN4 311 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 OR10G7Q8NGN6 311 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 LSM10Q969L4 123 aaKnown RBP8.07□□□□□ -1.12
TRERF1-201ENST00000340840 MAS1LP35410 378 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 IZUMO4Q1ZYL8 232 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 ZNF808Q8N4W9 903 aaPredicted RBP8.07□□□□□ -1.12
TRERF1-201ENST00000340840 TAF15Q92804 592 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRERF1-201ENST00000340840 SDSLQ96GA7 329 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 OR4C12Q96R67 309 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 SDF2L1Q9HCN8 221 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 TMEM242Q9NWH2 141 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 CHD8Q9HCK8 2581 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 CEACAM6P40199 344 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 TLE1Q04724 770 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 Q3ZCU0 254 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 OR1P1Q8NH06 330 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 C1QTNF5Q9BXJ0 243 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.07□□□□□ -1.12
TRERF1-201ENST00000340840 LOC102723996A0A087X1L8 192 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 SYNGR1O43759 233 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 SERPINA7P05543 415 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 FAM3BP58499 235 aaPredicted RBP8.07□□□□□ -1.12
TRERF1-201ENST00000340840 PMS2P11Q13670 270 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 SRSF7Q16629 238 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRERF1-201ENST00000340840 LBHQ53QV2 105 aaPredicted RBP8.07□□□□□ -1.12
TRERF1-201ENST00000340840 Q6ZSR3 168 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 TMEM183AQ8IXX5 376 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 IMMP1LQ96LU5 166 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 NOL4LQ96MY1 436 aaPredicted RBP8.07□□□□□ -1.12
TRERF1-201ENST00000340840 RBKSQ9H477 322 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 TAAR3PQ9P1P4 343 aa8.07□□□□□ -1.12
TRERF1-201ENST00000340840 TRBV24-1A0A075B6N3 115 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 ZNF320A2RRD8 509 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 J3QT63 122 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 FTH1P19P0C7X4 201 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 CA6P23280 308 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 RAB4BP61018 213 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 ERVK-16P61578 105 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 PPP1CBP62140 327 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 TGFBR3Q03167 851 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 ZNF385CQ66K41 422 aaPredicted RBP8.06□□□□□ -1.12
TRERF1-201ENST00000340840 Q6ZS49 121 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 OR1K1Q8NGR3 316 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 ZNF488Q96MN9 340 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 PRUNE2Q8WUY3 3088 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 FAM166BA8MTA8 275 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 A8MXE2 369 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 DVL1O14640 695 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 KBTBD11O94819 623 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 SOD3P08294 240 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 CCL4P13236 92 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 HOXA6P31267 233 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 CCKARP32238 428 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 GFI1BQ5VTD9 330 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 ALKBH2Q6NS38 261 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 CYP2G1PQ6ZSU1 146 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 TRAV39A0A0B4J263 110 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 TMEM250H0YL14 139 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 NAPSAO96009 420 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 EDN3P14138 238 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 ZNF816Q0VGE8 651 aaPredicted RBP8.06□□□□□ -1.12
TRERF1-201ENST00000340840 TBC1D28Q2M2D7 210 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 CDCP2Q5VXM1 449 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 MBD3L1Q8WWY6 194 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 REPIN1Q9BWE0 567 aaKnown RBP8.06□□□□□ -1.12
TRERF1-201ENST00000340840 ENY2Q9NPA8 101 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 OBP2BQ9NPH6 170 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 RYDENQ9NUL5 291 aaKnown RBP8.06□□□□□ -1.12
TRERF1-201ENST00000340840 FUT9Q9Y231 359 aa8.06□□□□□ -1.12
TRERF1-201ENST00000340840 SPTBN4Q9H254 2564 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms