RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 TPPP2P59282 170 aa13.13□□□□□ -0.31
LIMK2-203ENST00000340552 TMEM267Q0VDI3 215 aaPredicted RBP13.13□□□□□ -0.31
LIMK2-203ENST00000340552 ZNF695Q8IW36 515 aa13.13□□□□□ -0.31
LIMK2-203ENST00000340552 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
LIMK2-203ENST00000340552 LOXL4Q96JB6 756 aa13.13□□□□□ -0.31
LIMK2-203ENST00000340552 Q96M66 194 aa13.13□□□□□ -0.31
LIMK2-203ENST00000340552 EMC6Q9BV81 110 aa13.13□□□□□ -0.31
LIMK2-203ENST00000340552 DEFB126Q9BYW3 111 aa13.13□□□□□ -0.31
LIMK2-203ENST00000340552 ZNF552Q9H707 407 aaPredicted RBP13.13□□□□□ -0.31
LIMK2-203ENST00000340552 ZNF160Q9HCG1 818 aa13.13□□□□□ -0.31
LIMK2-203ENST00000340552 A0A1W2PNV4 684 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 CCL1P22362 96 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 MDH2P40926 338 aaKnown RBP13.12□□□□□ -0.31
LIMK2-203ENST00000340552 LCN2P80188 198 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 POU3F1Q03052 451 aaPredicted RBP13.12□□□□□ -0.31
LIMK2-203ENST00000340552 NCOA6Q14686 2063 aaPredicted RBP13.12□□□□□ -0.31
LIMK2-203ENST00000340552 PCOLCEQ15113 449 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 KCNIP4Q6PIL6 250 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 BRICD5Q6PL45 260 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 UNQ5815/PRO19632Q6UWF5 114 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 TCF23Q7RTU1 214 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 C20orf196Q8IYI0 205 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 SELENOHQ8IZQ5 122 aaKnown RBP13.12□□□□□ -0.31
LIMK2-203ENST00000340552 OR5T1Q8NG75 326 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 GPHA2Q96T91 129 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 SPIN2AQ99865 258 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 SPIN2BQ9BPZ2 258 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 PLK3Q9H4B4 646 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 SLC45A2Q9UMX9 530 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 LAMTOR2Q9Y2Q5 125 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 RNF114Q9Y508 228 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 LOC102723996A0A087X1L8 192 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 KLF7O75840 302 aaPredicted RBP13.12□□□□□ -0.31
LIMK2-203ENST00000340552 NPBWR2P48146 333 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 ZNF133P52736 654 aaPredicted RBP13.12□□□□□ -0.31
LIMK2-203ENST00000340552 DOK3Q7L591 496 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 NUDT10Q8NFP7 164 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 TMEM234Q8WY98 164 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 PIGTQ969N2 578 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 RBM24Q9BX46 236 aaKnown RBP13.12□□□□□ -0.31
LIMK2-203ENST00000340552 PATZ1Q9HBE1 687 aaKnown RBP13.12□□□□□ -0.31
LIMK2-203ENST00000340552 KLRF1Q9NZS2 232 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 UBE2J1Q9Y385 318 aaPredicted RBP13.12□□□□□ -0.31
LIMK2-203ENST00000340552 WIPI2Q9Y4P8 454 aa13.12□□□□□ -0.31
LIMK2-203ENST00000340552 ANKUB1A6NFN9 424 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 CTRLP40313 264 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 PAFAH1B2P68402 229 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 TESK1Q15569 626 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 SMIM15Q7Z3B0 74 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 LINC01551Q86U37 167 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 DTX1Q86Y01 620 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 GCNT2Q8N0V5 402 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 MRPL30Q8TCC3 161 aaKnown RBP13.11□□□□□ -0.31
LIMK2-203ENST00000340552 ABHD14BQ96IU4 210 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 TUBG2Q9NRH3 451 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 R4GN57 208 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 COL27A1Q8IZC6 1860 aaPredicted RBP13.11□□□□□ -0.31
LIMK2-203ENST00000340552 PLA2G2CQ5R387 149 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 MYPOPQ86VE0 399 aaPredicted RBP13.11□□□□□ -0.31
LIMK2-203ENST00000340552 OR10G3Q8NGC4 313 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 TMEM56Q96MV1 263 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 POLR1DQ9Y2S0 133 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 CHTOPQ9Y3Y2 248 aaKnown RBP13.11□□□□□ -0.31
LIMK2-203ENST00000340552 TMEM56-RWDD3S4R434 201 aa13.11□□□□□ -0.31
LIMK2-203ENST00000340552 IGHV1-45A0A0A0MS14 117 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 TMEM144Q7Z5S9 345 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 ZNF295-AS1Q8N0V1 137 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 RNF138Q8WVD3 245 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 COX11Q9Y6N1 276 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 DUXBA0A1W2PPF3 345 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 SERF1AO75920 110 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 CELA2AP08217 269 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 DTYMKP23919 212 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 DAP3P51398 398 aaKnown RBP13.1□□□□□ -0.31
LIMK2-203ENST00000340552 MLF1P58340 268 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 SRPXP78539 464 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 NMSQ5H8A3 153 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 OR2Y1Q8NGV0 311 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 ST8SIA1Q92185 356 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 LHX4Q969G2 390 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 LYZL4Q96KX0 146 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 METTL7AQ9H8H3 244 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 VDAC3Q9Y277 283 aa13.1□□□□□ -0.31
LIMK2-203ENST00000340552 ZNF814B7Z6K7 855 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 TMEM250H0YL14 139 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 SYNGR4O95473 234 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 CDAP32320 146 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 SUMO3P55854 103 aaPredicted RBP13.09□□□□□ -0.31
LIMK2-203ENST00000340552 HERV-K104P61576 105 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 DCAF12Q5T6F0 453 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 TBC1D26Q86UD7 250 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 Q8N976 141 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 OR4B1Q8NGF8 309 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 SVIPQ8NHG7 77 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 SCGB1C1Q8TD33 95 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 GATAD1Q8WUU5 269 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 VPS25Q9BRG1 176 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 LOXL2Q9Y4K0 774 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 RER1O15258 196 aa13.09□□□□□ -0.31
LIMK2-203ENST00000340552 HMGB3O15347 200 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms