RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 TSPAN15O95858 294 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 CSF1P09603 554 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 FAM106CPP0CH98 169 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 EBI3Q14213 229 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 HERPUD1Q15011 391 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 TMEM95Q3KNT9 176 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 SFXN4Q6P4A7 337 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 ODF3L1Q8IXM7 274 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 KLHDC1Q8N7A1 406 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 OR10R2Q8NGX6 335 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 RAB3CQ96E17 227 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 YIPF6Q96EC8 236 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 WNT10AQ9GZT5 417 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 Q9N2K0 584 aa12.26□□□□□ -0.45
VAPA-201ENST00000340541 IGKV1D-33P01593 117 aa12.25□□□□□ -0.45
VAPA-201ENST00000340541 IGKV1-33P01594 117 aa12.25□□□□□ -0.45
VAPA-201ENST00000340541 IL3RAP26951 378 aa12.25□□□□□ -0.45
VAPA-201ENST00000340541 HLA-DRB3P79483 266 aa12.25□□□□□ -0.45
VAPA-201ENST00000340541 MOB3BQ86TA1 216 aa12.25□□□□□ -0.45
VAPA-201ENST00000340541 IZUMO1Q8IYV9 350 aa12.25□□□□□ -0.45
VAPA-201ENST00000340541 FAM110DQ8TAY7 271 aaPredicted RBP12.25□□□□□ -0.45
VAPA-201ENST00000340541 SETD6Q8TBK2 473 aa12.25□□□□□ -0.45
VAPA-201ENST00000340541 AKR1E2Q96JD6 320 aa12.25□□□□□ -0.45
VAPA-201ENST00000340541 CMSS1Q9BQ75 279 aaKnown RBP12.25□□□□□ -0.45
VAPA-201ENST00000340541 ABHD14AQ9BUJ0 271 aa12.25□□□□□ -0.45
VAPA-201ENST00000340541 PARP12Q9H0J9 701 aaKnown RBP12.25□□□□□ -0.45
VAPA-201ENST00000340541 ABRACLQ9P1F3 81 aa12.25□□□□□ -0.45
VAPA-201ENST00000340541 DAPK2Q9UIK4 370 aa12.25□□□□□ -0.45
VAPA-201ENST00000340541 IGHV3-72A0A0B4J1Y9 119 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 SH2D7A6NKC9 451 aaPredicted RBP12.24□□□□□ -0.45
VAPA-201ENST00000340541 ZNF736B4DX44 427 aaPredicted RBP12.24□□□□□ -0.45
VAPA-201ENST00000340541 LANCL1O43813 399 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 SCTP09683 121 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 VSIG10L2P0DP72 767 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 SNRPBP14678 240 aaKnown RBP12.24□□□□□ -0.45
VAPA-201ENST00000340541 HIST1H1DP16402 221 aaKnown RBP12.24□□□□□ -0.45
VAPA-201ENST00000340541 GNB3P16520 340 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 TGFBR1P36897 503 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 MXD1Q05195 221 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 HIST2H2BDQ6DRA6 164 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 LYG1Q8N1E2 194 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 Q8N6K4 173 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 IL1F10Q8WWZ1 152 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 RBMXL1Q96E39 390 aaKnown RBP12.24□□□□□ -0.45
VAPA-201ENST00000340541 EAF1Q96JC9 268 aaPredicted RBP12.24□□□□□ -0.45
VAPA-201ENST00000340541 IFI27L2Q9H2X8 130 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 MOB4Q9Y3A3 225 aa12.24□□□□□ -0.45
VAPA-201ENST00000340541 IGKV1-6A0A0C4DH72 117 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 METTL21EPA6NDL7 271 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 TXNL1O43396 289 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 RGS11O94810 467 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 OPN1MWP04001 364 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 OPN1MW2P0DN77 364 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 OPN1MW3P0DN78 364 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 TMEM11P17152 192 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 HNF4GQ14541 408 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 ABCA11PQ4W5N1 156 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 TGIF2LXQ8IUE1 241 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 LGALS14Q8TCE9 139 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 ATG5Q9H1Y0 275 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.23□□□□□ -0.456e-7■■□□□ 13.2
VAPA-201ENST00000340541 OR1A1Q9P1Q5 309 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 MGAT4AQ9UM21 535 aa12.23□□□□□ -0.45
VAPA-201ENST00000340541 TET2Q6N021 2002 aaPredicted RBP12.23□□□□□ -0.45
VAPA-201ENST00000340541 TRDCB7Z8K6 153 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 M0QZK8 103 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 LPLP06858 475 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 FCGR3AP08637 254 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 SMIM18P0DKX4 95 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 CD1BP29016 333 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 VDAC2P45880 294 aaPredicted RBP12.22□□□□□ -0.45
VAPA-201ENST00000340541 OR3A3P47888 321 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 HES1Q14469 280 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 TIMM50Q3ZCQ8 353 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 ZNF833PQ6ZTB9 187 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 C5orf56Q8N8D9 126 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 C11orf44Q8N8P7 122 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 OR2AK2Q8NG84 335 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 ZNF251Q9BRH9 671 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 AGMATQ9BSE5 352 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 VCX3AQ9NNX9 186 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 PLSCR3Q9NRY6 295 aa12.22□□□□□ -0.45
VAPA-201ENST00000340541 ELF5Q9UKW6 265 aaPredicted RBP12.22□□□□□ -0.45
VAPA-201ENST00000340541 A0A075B6Q4 140 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 SAA2-SAA4A0A096LPE2 208 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 SERPINE3A8MV23 424 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 ITGB1BP1O14713 200 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 ST8SIA5O15466 376 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 FGF16O43320 207 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 AIREO43918 545 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 CD3GP09693 182 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 SAA2P0DJI9 122 aaPredicted RBP12.21□□□□□ -0.45
VAPA-201ENST00000340541 LSAMPQ13449 338 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 KPRPQ5T749 579 aaPredicted RBP12.21□□□□□ -0.45
VAPA-201ENST00000340541 OR5H6Q8NGV6 325 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 OR2T10Q8NGZ9 312 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 SLC25A38Q96DW6 304 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 SLC23A1Q9UHI7 598 aa12.21□□□□□ -0.45
VAPA-201ENST00000340541 CD28P10747 220 aa12.2□□□□□ -0.46
VAPA-201ENST00000340541 ZBTB25P24278 435 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms