RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 KIAA1324LA8MWY0 1029 aaPredicted RBP8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 OR2B8PP59922 312 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 ZNF345Q14585 488 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 TMEM108Q6UXF1 575 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 SPAG16Q8N0X2 631 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 COQ2Q96H96 371 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 SPIN2AQ99865 258 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 SPIN2BQ9BPZ2 258 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 ZNRD1Q9P1U0 126 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 A8MXE2 369 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 SPINT2O43291 252 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 OR4A8P0C604 315 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 PPT1P50897 306 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 NUBP1P53384 320 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 ZNF497Q6ZNH5 498 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 Q8NA96 180 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 RNF141Q8WVD5 230 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 DECR2Q9NUI1 292 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 TNCP24821 2201 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A10PA6NDY2 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A18PA6NE21 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A16PA6NEW6 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A20PA6NIJ5 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A8PA6NJQ4 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A7PA6NKC0 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 CEACAM18A8MTB9 384 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A22PA8MWA6 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A12PA8MX19 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A5PA8MXJ8 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A23PA8MXZ1 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 LYNX1G3V0Z9 82 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A15PP0C7V4 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A13PP0C7W8 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A14PP0C7W9 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 FAM90A24PP0C7X0 464 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 LYNX1P0DP58 116 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 GRNP28799 593 aaKnown RBP8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 C11orf53Q8IXP5 236 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 LILRB2Q8N423 598 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 GPR146Q96CH1 333 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 SHARPINQ9H0F6 387 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 PLEKHF2Q9H8W4 249 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 TMED3Q9Y3Q3 217 aa8.54□□□□□ -1.04
RBFOX1-202ENST00000340209 M0R1X1 148 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 HMGB3O15347 200 aaKnown RBP8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 FCGR3BO75015 233 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 HLA-GP17693 338 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 KRTCAP3Q53RY4 240 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 ZNF324BQ6AW86 544 aaPredicted RBP8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 IGFL3Q6UXB1 125 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 OR2C3Q8N628 320 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 DMBX1Q8NFW5 382 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 MEGF10Q96KG7 1140 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 C20orf24Q9BUV8 137 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 TRBV6-7A0A0A0MS04 114 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 SMCO3A2RU48 225 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 TMEM210A6NLX4 147 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 GPR37O15354 613 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 TSPAN15O95858 294 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 GPR12P47775 334 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 DYNLT3P51808 116 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 ELLP55199 621 aaPredicted RBP8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 EWSR1Q01844 656 aaKnown RBP eCLIP8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 GUSBP1Q15486 140 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 TESK1Q15569 626 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 RPL39P5Q59GN2 51 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 H1FOOQ8IZA3 346 aaPredicted RBP8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 C1orf162Q8NEQ5 155 aaPredicted RBP8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 LILRB1Q8NHL6 650 aaPredicted RBP8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 SFXN3Q9BWM7 321 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 WFDC1Q9HC57 220 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 CYTL1Q9NRR1 136 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 ASH1LQ9NR48 2969 aaKnown RBP8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 EPG5Q9HCE0 2579 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 IGSF23A1L1A6 192 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 TNFSF4P23510 183 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 CCKARP32238 428 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 RBPJQ06330 500 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 ATRAIDQ6UW56 229 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 GCSAMQ8N6F7 178 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 BVESQ8NE79 360 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 RND1Q92730 232 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 GALNT14Q96FL9 552 aa8.53□□□□□ -1.04
RBFOX1-202ENST00000340209 MFSD2BA6NFX1 497 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 CCL21O00585 134 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 PLA2G5P39877 138 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 CASP6P55212 293 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 UTF1Q5T230 341 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 OR2G3Q8NGZ4 309 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 ASB13Q8WXK3 278 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 MARC2Q969Z3 335 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 LRRC46Q96FV0 321 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 C18orf12Q96KH6 178 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 CEBPZOSA8MTT3 80 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 H7C1Q1 480 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 S1PR2O95136 353 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 IFNA17P01571 189 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 VDAC1P21796 283 aa8.52□□□□□ -1.05
RBFOX1-202ENST00000340209 REG1BP48304 166 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms