RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 KCNJ16Q9NPI9 418 aa13.76□□□□□ -0.21
LITAF-201ENST00000339430 CNOT4O95628 575 aaKnown RBP13.75□□□□□ -0.21
LITAF-201ENST00000339430 MPV17P39210 176 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 LINC00518Q8N0U6 118 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 C9orf106Q8NAJ2 232 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 SLC35B3Q9H1N7 401 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 CACNG5Q9UF02 275 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 POLDIP2Q9Y2S7 368 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 NBEAQ8NFP9 2946 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 IAPPP10997 89 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 CEBPGP53567 150 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 ERVK11-1P61568 191 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 TGFBR3Q03167 851 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 OR8G1Q15617 311 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 PRR30Q53SZ7 412 aaPredicted RBP13.75□□□□□ -0.21
LITAF-201ENST00000339430 ZNF295-AS1Q8N0V1 137 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 TINAGQ9UJW2 476 aa13.75□□□□□ -0.21
LITAF-201ENST00000339430 RP1L1Q8IWN7 2480 aaPredicted RBP13.74□□□□□ -0.21
LITAF-201ENST00000339430 PCP4L1A6NKN8 68 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 TFF1P04155 84 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 PGA5P0DJD9 388 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 CEACAM6P40199 344 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 MDH2P40926 338 aaKnown RBP13.74□□□□□ -0.21
LITAF-201ENST00000339430 BAXQ07812 192 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 HAGHQ16775 308 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 SPSB3Q6PJ21 355 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 ZNF826PQ6ZT77 177 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 SNRNP40Q96DI7 357 aaKnown RBP13.74□□□□□ -0.21
LITAF-201ENST00000339430 OBP2BQ9NPH6 170 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.74□□□□□ -0.21
LITAF-201ENST00000339430 WNT9BO14905 357 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 FAM53AQ6NSI3 398 aaPredicted RBP13.74□□□□□ -0.21
LITAF-201ENST00000339430 FAM214BQ7L5A3 538 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 ATP5SQ99766 215 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 FZR1Q9UM11 496 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 CACNA1DQ01668 2161 aa13.74□□□□□ -0.21
LITAF-201ENST00000339430 A0A1B0GU03 582 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 KIAA1324LA8MWY0 1029 aaPredicted RBP13.73□□□□□ -0.21
LITAF-201ENST00000339430 SH2D1BO14796 132 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 IGKV1-5P01602 117 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 ARG1P05089 322 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 MMP9P14780 707 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 TDGF1P3P51864 188 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 GABRA6Q16445 453 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 KRBOX4Q5JUW0 171 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 SLC25A24Q6NUK1 477 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 STX12Q86Y82 276 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 Q8IYB0 196 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 LFNGQ8NES3 379 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 HIST1H2BAQ96A08 127 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 PUS1Q9Y606 427 aaKnown RBP eCLIP13.73□□□□□ -0.21
LITAF-201ENST00000339430 ITPR1Q14643 2758 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 A0A1W2PPH5 198 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 RPL23AP62750 156 aaKnown RBP13.73□□□□□ -0.21
LITAF-201ENST00000339430 AKR1C8PQ5T2L2 129 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 VWA1Q6PCB0 445 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 THNSL2Q86YJ6 484 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 C15orf54Q8N8G6 183 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 KLF14Q8TD94 323 aaPredicted RBP13.73□□□□□ -0.21
LITAF-201ENST00000339430 BIN3Q9NQY0 253 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 RNF150Q9ULK6 438 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 SPTA1P02549 2419 aa13.73□□□□□ -0.21
LITAF-201ENST00000339430 ATRXP46100 2492 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 RBFOX3A6NFN3 312 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 A6NLC8 198 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 TXNL1O43396 289 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 PSPNO60542 156 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 HAND1O96004 215 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 RAC2P15153 192 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 FOXF2Q12947 444 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 ZNF585BQ52M93 769 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 MOB1BQ7L9L4 216 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 SFT2D1Q8WV19 159 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 GNPNAT1Q96EK6 184 aaPredicted RBP13.72□□□□□ -0.21
LITAF-201ENST00000339430 PRORYQ9H606 182 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 IQCF6A8MYZ5 107 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 NPIPB11E5RHQ5 1161 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 MLNRO43193 412 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 FBP1P09467 338 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 METTL15P1P0C7V9 234 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 HABP2Q14520 560 aaPredicted RBP13.72□□□□□ -0.21
LITAF-201ENST00000339430 ZNF146Q15072 292 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 GUSBP1Q15486 140 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 SEM1Q6ZVN7 128 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 RPRMLQ8N4K4 120 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 DRAM1Q8N682 238 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 TREM2Q9NZC2 230 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 FAM215AQ9Y5M1 114 aa13.72□□□□□ -0.21
LITAF-201ENST00000339430 A0A1W2PPE2 198 aa13.71□□□□□ -0.21
LITAF-201ENST00000339430 KIR2DL2P43627 348 aaPredicted RBP13.71□□□□□ -0.21
LITAF-201ENST00000339430 SULT1A1P50225 295 aa13.71□□□□□ -0.21
LITAF-201ENST00000339430 OR2B11Q5JQS5 317 aa13.71□□□□□ -0.21
LITAF-201ENST00000339430 SOHLH1Q5JUK2 328 aa13.71□□□□□ -0.21
LITAF-201ENST00000339430 OR1L1Q8NH94 360 aa13.71□□□□□ -0.21
LITAF-201ENST00000339430 FAM57AQ8TBR7 257 aa13.71□□□□□ -0.21
LITAF-201ENST00000339430 KLF2Q9Y5W3 355 aaPredicted RBP13.71□□□□□ -0.21
LITAF-201ENST00000339430 TPRP12270 2363 aaKnown RBP13.71□□□□□ -0.21
LITAF-201ENST00000339430 HEATR1Q9H583 2144 aaKnown RBP13.71□□□□□ -0.21
LITAF-201ENST00000339430 J3QW42 95 aa13.71□□□□□ -0.22
LITAF-201ENST00000339430 SYNGR2O43760 224 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms