RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 RAB27BO00194 218 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 LPLP06858 475 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 CD28P10747 220 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 TMEM11P17152 192 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 GADD45AP24522 165 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 IL3RAP26951 378 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 HES1Q14469 280 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 NEDD8Q15843 81 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 MOB1BQ7L9L4 216 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 C5orf56Q8N8D9 126 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 SETD6Q8TBK2 473 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 EAF1Q96JC9 268 aaPredicted RBP12.12□□□□□ -0.47
PRKN-201ENST00000338468 ABHD14AQ9BUJ0 271 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 PARP12Q9H0J9 701 aaKnown RBP12.12□□□□□ -0.47
PRKN-201ENST00000338468 RIMS4Q9H426 269 aaPredicted RBP12.12□□□□□ -0.47
PRKN-201ENST00000338468 Q9N2K0 584 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 SSR3Q9UNL2 185 aa12.12□□□□□ -0.47
PRKN-201ENST00000338468 NOTOA8MTQ0 251 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 ADARB2-AS1A8MUL3 147 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 M0QZK8 103 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 LANCL1O43813 399 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 RAB6AP20340 208 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 RANBP1P43487 201 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 TGIF2LXQ8IUE1 241 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 LYG1Q8N1E2 194 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 IL1F10Q8WWZ1 152 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 CHCHD6Q9BRQ6 235 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 IFI27L2Q9H2X8 130 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 C12orf4Q9NQ89 552 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 ABRACLQ9P1F3 81 aa12.11□□□□□ -0.47
PRKN-201ENST00000338468 IGKV1-6A0A0C4DH72 117 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 MFNGO00587 321 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 FGF16O43320 207 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 FBXO24O75426 580 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 SCTP09683 121 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 CLEC2LP0C7M8 214 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 CD36P16671 472 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 CD1BP29016 333 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 HLA-DRB3P79483 266 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 C2orf68Q2NKX9 166 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 TCTEX1D4Q5JR98 221 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 TPRA1Q86W33 373 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 OR10R2Q8NGX6 335 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 PTX4Q96A99 478 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 RAB3CQ96E17 227 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 CMSS1Q9BQ75 279 aaKnown RBP12.1□□□□□ -0.47
PRKN-201ENST00000338468 PLSCR3Q9NRY6 295 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 OR1A1Q9P1Q5 309 aa12.1□□□□□ -0.47
PRKN-201ENST00000338468 TXNL1O43396 289 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 CSF1P09603 554 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 GNB3P16520 340 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 SDC2P34741 201 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 OR3A3P47888 321 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 ARSJQ5FYB0 599 aaPredicted RBP12.09□□□□□ -0.47
PRKN-201ENST00000338468 C9orf152Q5JTZ5 239 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 C10orf99Q6UWK7 81 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 ZNF833PQ6ZTB9 187 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 OR2T10Q8NGZ9 312 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 KCTD7Q96MP8 289 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 CITED2Q99967 270 aaPredicted RBP12.09□□□□□ -0.47
PRKN-201ENST00000338468 ZNF251Q9BRH9 671 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 CENPOQ9BU64 300 aa12.09□□□□□ -0.47
PRKN-201ENST00000338468 MRPL20Q9BYC9 149 aaKnown RBP12.09□□□□□ -0.47
PRKN-201ENST00000338468 SAA2-SAA4A0A096LPE2 208 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 LOC100506127A0A0U1RQW1 187 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 ST8SIA5O15466 376 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 RGS11O94810 467 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 MOSP00540 346 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 SAA2P0DJI9 122 aaPredicted RBP12.08□□□□□ -0.48
PRKN-201ENST00000338468 HIST1H1DP16402 221 aaKnown RBP12.08□□□□□ -0.48
PRKN-201ENST00000338468 CD83Q01151 205 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 LSAMPQ13449 338 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 SFXN4Q6P4A7 337 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 Q8N9W7 124 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 TSPAN14Q8NG11 270 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 OR2AK2Q8NG84 335 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 OR5AU1Q8NGC0 362 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 FAM110DQ8TAY7 271 aaPredicted RBP12.08□□□□□ -0.48
PRKN-201ENST00000338468 NABP2Q9BQ15 211 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 AGMATQ9BSE5 352 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 DAPK2Q9UIK4 370 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 ELF5Q9UKW6 265 aaPredicted RBP12.08□□□□□ -0.48
PRKN-201ENST00000338468 MGAT4AQ9UM21 535 aa12.08□□□□□ -0.48
PRKN-201ENST00000338468 TRIM64CA6NLI5 447 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 LINC01548A6NM66 108 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 ITGB1BP1O14713 200 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 PEX14O75381 377 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 TNFAIP8O95379 198 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 FCGR3AP08637 254 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 SNRPBP14678 240 aaKnown RBP12.07□□□□□ -0.48
PRKN-201ENST00000338468 F2RL1P55085 397 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 MXD1Q05195 221 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 NSUN5P1Q3KNT7 163 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 C1QL4Q86Z23 238 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 YIPF6Q96EC8 236 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 RITA1Q96K30 269 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 C11orf54Q9H0W9 315 aaPredicted RBP12.07□□□□□ -0.48
PRKN-201ENST00000338468 SLC23A1Q9UHI7 598 aa12.07□□□□□ -0.48
PRKN-201ENST00000338468 A0A075B6Q4 140 aa12.06□□□□□ -0.48
PRKN-201ENST00000338468 A0A087WXM4 84 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms