RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 GPHA2Q96T91 129 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 GAL3ST2Q9H3Q3 398 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 RANGRFQ9HD47 186 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 PRR13Q9NZ81 148 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 MGAT4CQ9UBM8 478 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 KCNS2Q9ULS6 477 aa12.16□□□□□ -0.46
CDK5RAP3-201ENST00000338399 YPEL1O60688 119 aa12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 NFYBP25208 207 aa12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 PDLIM4P50479 330 aa12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ATP5J2P56134 94 aa12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 UTF1Q5T230 341 aa12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 PSMG3-AS1Q96PY0 264 aa12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 YPEL2Q96QA6 119 aa12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 PHB2Q99623 299 aa12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 NAA60Q9H7X0 242 aa12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 LINC00574Q9H8X3 128 aa12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 GFOD1Q9NXC2 390 aa12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 USP9YO00507 2555 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ARID1AO14497 2285 aa12.15□□□□□ -0.47
CDK5RAP3-201ENST00000338399 TRBV23-1A0A0A0MS06 115 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 GPR37O15354 613 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 MPPED1O15442 326 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 TNFSF12O43508 249 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 IFNA2P01563 188 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 IGLV2-14P01704 120 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 KCTD9Q7L273 389 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 CMTM1Q8IZ96 169 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 LEAP2Q969E1 77 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 FYTTD1Q96QD9 318 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 BPESC1Q9GZL8 116 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 OR2D2Q9H210 308 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 PSG11Q9UQ72 335 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 TENM4Q6N022 2769 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 F5H0A9 414 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ST8SIA5O15466 376 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 PHF1O43189 567 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 SLC22A5O76082 557 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 RGS11O94810 467 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 KRTAP10-9P60411 292 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 RND3P61587 244 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 GNB2P62879 340 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ANKRD55Q3KP44 614 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 SP6Q3SY56 376 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 TBC1D26Q86UD7 250 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 BVESQ8NE79 360 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 EDARADDQ8WWZ3 215 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 KCNIP3Q9Y2W7 256 aa12.14□□□□□ -0.47
CDK5RAP3-201ENST00000338399 GOSR2O14653 212 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 PGLYRP1O75594 196 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 OR5AC1P0C628 307 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ZNF134P52741 427 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 C11orf88Q6PI97 169 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 HEPN1Q6WQI6 88 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 DRAM1Q8N682 238 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ZNF645Q8N7E2 425 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 PERPQ96FX8 193 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ABHD14BQ96IU4 210 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 AKR1E2Q96JD6 320 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 DMRTB1Q96MA1 342 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 SSBP3Q9BWW4 388 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 RPUSD1Q9UJJ7 312 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ARHGAP32A7KAX9 2087 aa12.13□□□□□ -0.47
CDK5RAP3-201ENST00000338399 SLC31A2O15432 143 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 SIX6O95475 246 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 SSTR2P30874 369 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 EIF2B2P49770 351 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 DLX6P56179 175 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 OR10A7Q8NGE5 316 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 OR52M1Q8NGK5 317 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 COQ8AQ8NI60 647 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 FAM168AQ92567 244 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 MARVELD3Q96A59 401 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 GALNT14Q96FL9 552 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 TP53RKQ96S44 253 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 AGMATQ9BSE5 352 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 CHIAQ9BZP6 476 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ZNF436Q9C0F3 470 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 BARX1Q9HBU1 254 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 SPG11Q96JI7 2443 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 PPIAL4CA0A0B4J2A2 164 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 C3orf85A0A1B0GTC6 90 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 A0A1W2PPE3 182 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 PPIAL4GP0DN37 164 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ANXA3P12429 323 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 S100GP29377 79 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 TMEM187Q14656 261 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 TMEM30BQ3MIR4 351 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ESCO2Q56NI9 601 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 HIST2H2BCQ6DN03 193 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 C5orf30Q96GV9 206 aa12.12□□□□□ -0.47
CDK5RAP3-201ENST00000338399 A0A0B4J2A0 478 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 DBX1A6NMT0 343 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 C22orf46C9J442 243 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 CCSO14618 274 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 IGHV2-5P01817 119 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 GNG10P50151 68 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 CT45A1Q5HYN5 189 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 OR51H1Q8NH63 302 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 CLDND2Q8NHS1 167 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 CT45A3Q8NHU0 189 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms