RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 GNG10P50151 68 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 RAB7AP51149 207 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 ZNF134P52741 427 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 MADCAM1Q13477 382 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 IL18Q14116 193 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 HERPUD1Q15011 391 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 AANATQ16613 207 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 IGSF11Q5DX21 431 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 CT45A1Q5HYN5 189 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 UTF1Q5T230 341 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 Q6YL49 198 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 LINC00299Q6ZSB3 139 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 LHFPL4Q7Z7J7 247 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 LDLRAD3Q86YD5 345 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 GVQW1Q8N7I0 195 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 OR2AK2Q8NG84 335 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 CT45A3Q8NHU0 189 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 FAM216AQ8WUB2 273 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 FCAMRQ8WWV6 532 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 AJUBAQ96IF1 538 aa12.46□□□□□ -0.41
SEC13-201ENST00000337354 LY6LH3BQJ8 138 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 GABARAPH6UMI1 98 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 BET1O15155 118 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 RBBP9O75884 186 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 ETV6P41212 452 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 ARHGDIBP52566 201 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 ARPC4P59998 168 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 GNMTQ14749 295 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 CCDC144NLQ6NUI1 221 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 CCDC190Q86UF4 302 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 SIGLECL1Q8N7X8 197 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 OR5AP2Q8NGF4 316 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 OR6Q1Q8NGQ2 317 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 ZNF48Q96MX3 618 aaPredicted RBP12.45□□□□□ -0.42
SEC13-201ENST00000337354 GINS4Q9BRT9 223 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 ABHD14AQ9BUJ0 271 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 RDH8Q9NYR8 311 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 OR1A1Q9P1Q5 309 aa12.45□□□□□ -0.42
SEC13-201ENST00000337354 SOX21Q9Y651 276 aaPredicted RBP12.45□□□□□ -0.42
SEC13-201ENST00000337354 TCF21O43680 179 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 RCVRNP35243 200 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 ZNF137PP52743 207 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 HILS1P60008 231 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 ACTBP60709 375 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 ACTG1P63261 375 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 SSBP1Q04837 148 aaKnown RBP12.44□□□□□ -0.42
SEC13-201ENST00000337354 SSX2Q16385 188 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 CNPY1Q3B7I2 92 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 SPANXN2Q5MJ10 180 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 LDLRAD2Q5SZI1 272 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 TPTE2P1Q5T6R2 138 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 FAM53AQ6NSI3 398 aaPredicted RBP12.44□□□□□ -0.42
SEC13-201ENST00000337354 FAM131AQ6UXB0 335 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 TMEM86BQ8N661 226 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 GCDHQ92947 438 aaPredicted RBP12.44□□□□□ -0.42
SEC13-201ENST00000337354 RPEQ96AT9 228 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 DPAGT1Q9H3H5 408 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 NECAP2Q9NVZ3 263 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 PIPOXQ9P0Z9 390 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 ZNRD1Q9P1U0 126 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 MTFP1Q9UDX5 166 aa12.44□□□□□ -0.42
SEC13-201ENST00000337354 A0A1W2PPE3 182 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 MEIS3P1A6NDR6 274 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 VGLL3A8MV65 326 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 GAPDHP04406 335 aaKnown RBP12.43□□□□□ -0.42
SEC13-201ENST00000337354 DYNLT3P51808 116 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 TAS2R46P59540 309 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 LYSMD2Q8IV50 215 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 OR52I2Q8NH67 350 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 C17orf50Q8WW18 174 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 SSMEM1Q8WWF3 244 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 SNAPC3Q92966 411 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 AGMATQ9BSE5 352 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 C11orf54Q9H0W9 315 aaPredicted RBP12.43□□□□□ -0.42
SEC13-201ENST00000337354 ZNF107Q9UII5 783 aaPredicted RBP12.43□□□□□ -0.42
SEC13-201ENST00000337354 HILPDAQ9Y5L2 63 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 POMT1Q9Y6A1 747 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 CLDN34H7C241 214 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 RAB29O14966 203 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 SLC31A2O15432 143 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 TXNL1O43396 289 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 GSTZ1O43708 216 aaPredicted RBP12.43□□□□□ -0.42
SEC13-201ENST00000337354 BRS3P32247 399 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 IER3P46695 156 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 OR3A3P47888 321 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 BAMBIQ13145 260 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 OVCH2Q7RTZ1 564 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 H1FOOQ8IZA3 346 aaPredicted RBP12.43□□□□□ -0.42
SEC13-201ENST00000337354 OR8H3Q8N146 312 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 LYG1Q8N1E2 194 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 OR5R1Q8NH85 324 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 SMIM4Q8WVI0 70 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 TOMM40LQ969M1 308 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 ST6GALNAC6Q969X2 333 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 TAS2R8Q9NYW2 309 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 KLK11Q9UBX7 282 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 GAB2Q9UQC2 676 aa12.43□□□□□ -0.42
SEC13-201ENST00000337354 MDFIC2A0A1B0GVS7 189 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 BTBD17A6NE02 478 aa12.42□□□□□ -0.42
SEC13-201ENST00000337354 OR5H8P0DN80 308 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms